DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Trichomonas vaginalis
Taxonomy: Eukaryota; Parabasalidea; Trichomonada; Trichomonadida; Trichomonadidae; Trichomonadinae; Trichomonas
source (downloaded: 2007-01-12)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
86553.m00015 External link tx SF
  tx PF
80906.m00327 External link tx SF
  tx PF
81851.m00057 External link tx SF
  tx PF
84258.m00138 External link tx SF
  tx PF
81840.m00160 External link tx SF
  tx PF
91452.m00075 External link tx SF
  tx PF
84943.m00181 External link tx SF
  tx PF
80906.m00286 External link tx SF
  tx PF
86647.m00166 External link tx SF
  tx PF
90380.m00234 External link tx SF
  tx PF
89137.m00117 External link tx SF
  tx PF
96092.m00176 External link tx SF
  tx PF
94663.m00101 External link tx SF
  tx PF No hits
96530.m00007 External link tx SF
  tx PF
93272.m00094 External link tx SF
  tx PF
95238.m00098 External link tx SF
  tx PF
85241.m00258 External link tx SF
  tx PF
91741.m00005 External link tx SF
  tx PF
87150.m00225 External link tx SF
  tx PF
89234.m00115 External link tx SF
  tx PF No hits
89809.m00055 External link tx SF
  tx PF No hits
84458.m00185 External link tx SF
  tx PF
82039.m00050 External link tx SF
  tx PF
89875.m00008 External link tx SF
  tx PF
92547.m00019 External link tx SF
  tx PF
96536.m00005 External link tx SF
  tx PF
93335.m00034 External link tx SF
  tx PF
96353.m00074 External link tx SF
  tx PF
91956.m00008 External link tx SF
  tx PF
93948.m00008 External link tx SF
  tx PF
90453.m00007 External link tx SF
  tx PF
121191.m00003 External link tx SF
  tx PF No hits
90639.m00028 External link tx SF
  tx PF
92634.m00005 External link tx SF
  tx PF
91444.m00013 External link tx SF
  tx PF
123389.m00003 External link tx SF
  tx PF
95655.m00019 External link tx SF
  tx PF
140209.m00003 External link tx SF
  tx PF
90717.m00035 External link tx SF
  tx PF
82174.m00098 External link tx SF
  tx PF
97308.m00012 External link tx SF
  tx PF
85431.m00013 External link tx SF
  tx PF
91672.m00006 External link tx SF
  tx PF
95674.m00194 External link tx SF
  tx PF
114024.m00004 External link tx SF
  tx PF
95058.m00005 External link tx SF
  tx PF
80729.m00114 External link tx SF
  tx PF
94466.m00029 External link tx SF
  tx PF
94427.m00006 External link tx SF
  tx PF
143038.m00005 External link tx SF
  tx PF