DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Vitis vinifera
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; Vitales; Vitaceae; Vitis
source (downloaded: 2007-09-28)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
GSVIVP00024911001 vt SF
  vt PF
GSVIVP00030224001 vt SF
  vt PF
GSVIVP00038745001 vt SF
  vt PF
GSVIVP00024500001 vt SF
  vt PF
GSVIVP00029724001 vt SF
  vt PF
GSVIVP00009253001 vt SF
  vt PF
GSVIVP00022100001 vt SF
  vt PF
GSVIVP00022235001 vt SF
  vt PF
GSVIVP00026908001 vt SF
  vt PF
GSVIVP00002530001 vt SF
  vt PF
GSVIVP00017888001 vt SF
  vt PF
GSVIVP00033958001 vt SF
  vt PF
GSVIVP00029898001 vt SF
  vt PF
GSVIVP00024548001 vt SF
  vt PF
GSVIVP00001889001 vt SF
  vt PF
GSVIVP00015084001 vt SF
  vt PF
GSVIVP00033096001 vt SF
  vt PF
GSVIVP00024922001 vt SF
  vt PF
GSVIVP00016564001 vt SF
  vt PF
GSVIVP00013494001 vt SF
  vt PF
GSVIVP00035949001 vt SF
  vt PF
GSVIVP00018182001 vt SF
  vt PF
GSVIVP00028067001 vt SF
  vt PF
GSVIVP00019179001 vt SF
  vt PF
GSVIVP00025490001 vt SF
  vt PF
GSVIVP00036842001 vt SF
  vt PF
GSVIVP00032414001 vt SF
  vt PF
GSVIVP00001890001 vt SF
  vt PF
GSVIVP00020448001 vt SF
  vt PF
GSVIVP00022648001 vt SF
  vt PF
GSVIVP00020624001 vt SF
  vt PF
GSVIVP00029575001 vt SF
  vt PF
GSVIVP00034329001 vt SF
  vt PF
GSVIVP00035425001 vt SF
  vt PF
GSVIVP00018537001 vt SF
  vt PF No hits
GSVIVP00014947001 vt SF
  vt PF
GSVIVP00015901001 vt SF
  vt PF
GSVIVP00037541001 vt SF
  vt PF
GSVIVP00003327001 vt SF
  vt PF
GSVIVP00021051001 vt SF
  vt PF
GSVIVP00035130001 vt SF
  vt PF
GSVIVP00018167001 vt SF
  vt PF
GSVIVP00016157001 vt SF
  vt PF
GSVIVP00024387001 vt SF
  vt PF No hits
GSVIVP00030113001 vt SF
  vt PF
GSVIVP00006020001 vt SF
  vt PF
GSVIVP00015331001 vt SF
  vt PF
GSVIVP00024145001 vt SF
  vt PF
GSVIVP00036778001 vt SF
  vt PF
GSVIVP00006101001 vt SF
  vt PF