DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Saccharomyces bayanus MIT
Taxonomy: Eukaryota; Fungi; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
source (downloaded: 2004-07-16)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ORFP:23848 y1 SF
  y1 PF
ORFP:5377 y1 SF
  y1 PF
ORFP:8357 y1 SF
  y1 PF
ORFP:17660 y1 SF
  y1 PF
ORFP:25568 y1 SF
  y1 PF
ORFP:2668 y1 SF
  y1 PF
ORFP:6302 y1 SF
  y1 PF
ORFP:15667 y1 SF
  y1 PF
ORFP:11228 y1 SF
  y1 PF
ORFP:25647 y1 SF
  y1 PF
ORFP:18683 y1 SF
  y1 PF
ORFP:24940 y1 SF
  y1 PF
ORFP:15132 y1 SF
  y1 PF
ORFP:14038 y1 SF
  y1 PF
ORFP:12632 y1 SF
  y1 PF
ORFP:11848 y1 SF
  y1 PF
ORFP:14629 y1 SF
  y1 PF
ORFP:22236 y1 SF
  y1 PF
ORFP:21342 y1 SF
  y1 PF
ORFP:11047 y1 SF
  y1 PF
ORFP:21959 y1 SF
  y1 PF
ORFP:14746 y1 SF
  y1 PF
ORFP:24077 y1 SF
  y1 PF
ORFP:16896 y1 SF
  y1 PF
ORFP:12161 y1 SF
  y1 PF
ORFP:3364 y1 SF
  y1 PF
ORFP:24510 y1 SF
  y1 PF
ORFP:8710 y1 SF
  y1 PF
ORFP:16783 y1 SF
  y1 PF
ORFP:1127 y1 SF
  y1 PF
ORFP:1365 y1 SF
  y1 PF
ORFP:24374 y1 SF
  y1 PF
ORFP:12667 y1 SF
  y1 PF
ORFP:11004 y1 SF
  y1 PF
ORFP:17002 y1 SF
  y1 PF
ORFP:18098 y1 SF
  y1 PF
ORFP:24278 y1 SF
  y1 PF
ORFP:5419 y1 SF
  y1 PF
ORFP:666 y1 SF
  y1 PF
ORFP:16846 y1 SF
  y1 PF
ORFP:24140 y1 SF
  y1 PF
ORFP:10973 y1 SF
  y1 PF
ORFP:4515 y1 SF
  y1 PF
ORFP:4486 y1 SF
  y1 PF
ORFP:2117 y1 SF
  y1 PF
ORFP:7160 y1 SF
  y1 PF
ORFP:18194 y1 SF
  y1 PF
ORFP:15455 y1 SF
  y1 PF
ORFP:17664 y1 SF
  y1 PF
ORFP:15411 y1 SF
  y1 PF