DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Saccharomyces mikatae MIT
Taxonomy: Eukaryota; Fungi; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
source (downloaded: 2004-07-16)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ORFP:5075 y6 SF
  y6 PF
ORFP:22312 y6 SF
  y6 PF
ORFP:7226 y6 SF
  y6 PF
ORFP:16490 y6 SF
  y6 PF
ORFP:20516 y6 SF
  y6 PF
ORFP:22393 y6 SF
  y6 PF
ORFP:13027 y6 SF
  y6 PF
ORFP:8211 y6 SF
  y6 PF
ORFP:13795 y6 SF
  y6 PF
ORFP:11770 y6 SF
  y6 PF
ORFP:22202 y6 SF
  y6 PF
ORFP:1998 y6 SF
  y6 PF
ORFP:6025 y6 SF
  y6 PF
ORFP:14438 y6 SF
  y6 PF
ORFP:11216 y6 SF
  y6 PF
ORFP:4840 y6 SF
  y6 PF
ORFP:23122 y6 SF
  y6 PF
ORFP:15505 y6 SF
  y6 PF
ORFP:9825 y6 SF
  y6 PF
ORFP:11804 y6 SF
  y6 PF
ORFP:5049 y6 SF
  y6 PF
ORFP:15342 y6 SF
  y6 PF
ORFP:9027 y6 SF
  y6 PF
ORFP:10452 y6 SF
  y6 PF
ORFP:1175 y6 SF
  y6 PF
ORFP:16116 y6 SF
  y6 PF
ORFP:3344 y6 SF
  y6 PF
ORFP:6671 y6 SF
  y6 PF
ORFP:4144 y6 SF
  y6 PF
ORFP:19126 y6 SF
  y6 PF
ORFP:16481 y6 SF
  y6 PF
ORFP:16040 y6 SF
  y6 PF
ORFP:21336 y6 SF
  y6 PF
ORFP:8996 y6 SF
  y6 PF
ORFP:11453 y6 SF
  y6 PF
ORFP:1301 y6 SF
  y6 PF
ORFP:14712 y6 SF
  y6 PF
ORFP:17034 y6 SF
  y6 PF
ORFP:2597 y6 SF
  y6 PF
ORFP:19176 y6 SF
  y6 PF
ORFP:14172 y6 SF
  y6 PF
ORFP:13610 y6 SF
  y6 PF
ORFP:7655 y6 SF
  y6 PF
ORFP:11260 y6 SF
  y6 PF
ORFP:20730 y6 SF
  y6 PF
ORFP:1560 y6 SF
  y6 PF
ORFP:78 y6 SF
  y6 PF
ORFP:5132 y6 SF
  y6 PF
ORFP:19661 y6 SF
  y6 PF
ORFP:14441 y6 SF
  y6 PF