DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Dictyostelium purpureum
Taxonomy: Eukaryota; Mycetozoa; Dictyosteliida; Dictyostelium
source (downloaded: 2008-08-19)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Dicpu1|30919|e_gw1.69.13.1 External link yd SF
  yd PF
jgi|Dicpu1|98546|estExt_fgeneshDP_pg.C_2010002 External link yd SF
  yd PF
jgi|Dicpu1|151306|GID1.0041995 External link yd SF
  yd PF
jgi|Dicpu1|83500|fgeneshDP_pg.C_scaffold_378000015 External link yd SF
  yd PF
jgi|Dicpu1|97542|estExt_fgeneshDP_pg.C_830004 External link yd SF
  yd PF
jgi|Dicpu1|90623|fgeneshDP_pm.C_scaffold_540000001 External link yd SF
  yd PF
jgi|Dicpu1|78095|fgeneshDP_pg.C_scaffold_93000010 External link yd SF
  yd PF No hits
jgi|Dicpu1|77444|fgeneshDP_pg.C_scaffold_73000029 External link yd SF
  yd PF
jgi|Dicpu1|77372|fgeneshDP_pg.C_scaffold_71000024 External link yd SF
  yd PF
jgi|Dicpu1|159043|GID1.0049669 External link yd SF
  yd PF
jgi|Dicpu1|97535|estExt_fgeneshDP_pg.C_810039 External link yd SF
  yd PF
jgi|Dicpu1|55210|estExt_Genewise1Plus.C_1210006 External link yd SF
  yd PF
jgi|Dicpu1|95045|estExt_fgeneshDP_pm.C_2040002 External link yd SF
  yd PF
jgi|Dicpu1|96381|estExt_fgeneshDP_pg.C_80007 External link yd SF
  yd PF
jgi|Dicpu1|99685|estExt_fgeneshDP_pg.C_4370003 External link yd SF
  yd PF
jgi|Dicpu1|51958|estExt_Genewise1.C_8110001 External link yd SF
  yd PF
jgi|Dicpu1|72172|fgeneshDP_kg.C_scaffold_83000007 External link yd SF
  yd PF
jgi|Dicpu1|155826|GID1.0046480 External link yd SF
  yd PF
jgi|Dicpu1|91945|estExt_fgeneshDP_kg.C_1050003 External link yd SF
  yd PF
jgi|Dicpu1|159109|GID1.0049735 External link yd SF
  yd PF
jgi|Dicpu1|81331|fgeneshDP_pg.C_scaffold_230000018 External link yd SF
  yd PF
jgi|Dicpu1|77360|fgeneshDP_pg.C_scaffold_71000012 External link yd SF
  yd PF
jgi|Dicpu1|92966|estExt_fgeneshDP_kg.C_3830006 External link yd SF
  yd PF
jgi|Dicpu1|150926|GID1.0041615 External link yd SF
  yd PF
jgi|Dicpu1|96721|estExt_fgeneshDP_pg.C_260001 External link yd SF
  yd PF
jgi|Dicpu1|84315|fgeneshDP_pg.C_scaffold_466000004 External link yd SF
  yd PF
jgi|Dicpu1|99939|estExt_fgeneshDP_pg.C_5480001 External link yd SF
  yd PF
jgi|Dicpu1|78486|fgeneshDP_pg.C_scaffold_105000020 External link yd SF
  yd PF No hits
jgi|Dicpu1|77364|fgeneshDP_pg.C_scaffold_71000016 External link yd SF
  yd PF
jgi|Dicpu1|82915|fgeneshDP_pg.C_scaffold_332000010 External link yd SF
  yd PF
jgi|Dicpu1|80812|fgeneshDP_pg.C_scaffold_204000003 External link yd SF
  yd PF
jgi|Dicpu1|99760|estExt_fgeneshDP_pg.C_4660001 External link yd SF
  yd PF
jgi|Dicpu1|147090|GID1.0037779 External link yd SF
  yd PF No hits
jgi|Dicpu1|151803|GID1.0042492 External link yd SF
  yd PF
jgi|Dicpu1|34225|e_gw1.138.36.1 External link yd SF
  yd PF
jgi|Dicpu1|153661|GID1.0044350 External link yd SF
  yd PF
jgi|Dicpu1|98323|estExt_fgeneshDP_pg.C_1700008 External link yd SF
  yd PF
jgi|Dicpu1|155440|GID1.0046094 External link yd SF
  yd PF
jgi|Dicpu1|92150|estExt_fgeneshDP_kg.C_1450001 External link yd SF
  yd PF
jgi|Dicpu1|96067|estExt_fgeneshDP_pm.C_5760001 External link yd SF
  yd PF
jgi|Dicpu1|58394|estExt_Genewise1Plus.C_4080007 External link yd SF
  yd PF
jgi|Dicpu1|157342|GID1.0047996 External link yd SF
  yd PF
jgi|Dicpu1|147986|GID1.0038675 External link yd SF
  yd PF
jgi|Dicpu1|96050|estExt_fgeneshDP_pm.C_5610001 External link yd SF
  yd PF
jgi|Dicpu1|100099|estExt_fgeneshDP_pg.C_6620003 External link yd SF
  yd PF No hits
jgi|Dicpu1|89788|fgeneshDP_pm.C_scaffold_337000008 External link yd SF
  yd PF
jgi|Dicpu1|96898|estExt_fgeneshDP_pg.C_350041 External link yd SF
  yd PF
jgi|Dicpu1|156021|GID1.0046675 External link yd SF
  yd PF
jgi|Dicpu1|57361|estExt_Genewise1Plus.C_2790002 External link yd SF
  yd PF
jgi|Dicpu1|147158|GID1.0037847 External link yd SF
  yd PF