DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Dictyostelium purpureum
Taxonomy: Eukaryota; Mycetozoa; Dictyosteliida; Dictyostelium
source (downloaded: 2008-08-19)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Dicpu1|51917|estExt_Genewise1.C_7500001 External link yd SF
  yd PF
jgi|Dicpu1|154675|GID1.0045329 External link yd SF
  yd PF
jgi|Dicpu1|92172|estExt_fgeneshDP_kg.C_1480005 External link yd SF
  yd PF
jgi|Dicpu1|98517|estExt_fgeneshDP_pg.C_1960001 External link yd SF
  yd PF
jgi|Dicpu1|97920|estExt_fgeneshDP_pg.C_1220013 External link yd SF
  yd PF
jgi|Dicpu1|26731|e_gw1.16.18.1 External link yd SF
  yd PF
jgi|Dicpu1|92812|estExt_fgeneshDP_kg.C_3230001 External link yd SF
  yd PF
jgi|Dicpu1|80813|fgeneshDP_pg.C_scaffold_204000004 External link yd SF
  yd PF
jgi|Dicpu1|78030|fgeneshDP_pg.C_scaffold_91000011 External link yd SF
  yd PF
jgi|Dicpu1|151325|GID1.0042014 External link yd SF
  yd PF
jgi|Dicpu1|160378|GID1.0050965 External link yd SF
  yd PF
jgi|Dicpu1|160463|GID1.0051024 External link yd SF
  yd PF
jgi|Dicpu1|150464|GID1.0041153 External link yd SF
  yd PF
jgi|Dicpu1|59013|estExt_Genewise1Plus.C_5500012 External link yd SF
  yd PF
jgi|Dicpu1|76145|fgeneshDP_pg.C_scaffold_40000007 External link yd SF
  yd PF
jgi|Dicpu1|77715|fgeneshDP_pg.C_scaffold_81000005 External link yd SF
  yd PF
jgi|Dicpu1|77795|fgeneshDP_pg.C_scaffold_83000015 External link yd SF
  yd PF
jgi|Dicpu1|98959|estExt_fgeneshDP_pg.C_2680001 External link yd SF
  yd PF
jgi|Dicpu1|73959|fgeneshDP_pg.C_scaffold_2000016 External link yd SF
  yd PF No hits
jgi|Dicpu1|156868|GID1.0047522 External link yd SF
  yd PF
jgi|Dicpu1|149222|GID1.0039911 External link yd SF
  yd PF
jgi|Dicpu1|42743|e_gw1.484.13.1 External link yd SF
  yd PF No hits
jgi|Dicpu1|152142|GID1.0042831 External link yd SF
  yd PF
jgi|Dicpu1|39700|e_gw1.303.16.1 External link yd SF
  yd PF
jgi|Dicpu1|77129|fgeneshDP_pg.C_scaffold_64000033 External link yd SF
  yd PF No hits
jgi|Dicpu1|79375|fgeneshDP_pg.C_scaffold_139000018 External link yd SF
  yd PF No hits
jgi|Dicpu1|159280|GID1.0049906 External link yd SF
  yd PF
jgi|Dicpu1|79707|fgeneshDP_pg.C_scaffold_153000020 External link yd SF
  yd PF
jgi|Dicpu1|154894|GID1.0045548 External link yd SF
  yd PF No hits
jgi|Dicpu1|91524|estExt_fgeneshDP_kg.C_480003 External link yd SF
  yd PF
jgi|Dicpu1|83535|fgeneshDP_pg.C_scaffold_382000004 External link yd SF
  yd PF No hits
jgi|Dicpu1|24166|gw1.13.131.1 External link yd SF
  yd PF
jgi|Dicpu1|158728|GID1.0049354 External link yd SF
  yd PF No hits
jgi|Dicpu1|159839|GID1.0050459 External link yd SF
  yd PF
jgi|Dicpu1|98475|estExt_fgeneshDP_pg.C_1890005 External link yd SF
  yd PF No hits
jgi|Dicpu1|51636|estExt_Genewise1.C_5980003 External link yd SF
  yd PF
jgi|Dicpu1|154980|GID1.0045634 External link yd SF
  yd PF No hits
jgi|Dicpu1|155300|GID1.0045954 External link yd SF
  yd PF
jgi|Dicpu1|148961|GID1.0039650 External link yd SF
  yd PF No hits
jgi|Dicpu1|92118|estExt_fgeneshDP_kg.C_1390001 External link yd SF
  yd PF
jgi|Dicpu1|14027|gw1.274.39.1 External link yd SF
  yd PF
jgi|Dicpu1|78469|fgeneshDP_pg.C_scaffold_105000003 External link yd SF
  yd PF No hits
jgi|Dicpu1|96404|estExt_fgeneshDP_pg.C_80069 External link yd SF
  yd PF
jgi|Dicpu1|29919|e_gw1.53.49.1 External link yd SF
  yd PF
jgi|Dicpu1|41822|e_gw1.412.2.1 External link yd SF
  yd PF
jgi|Dicpu1|150027|GID1.0040716 External link yd SF
  yd PF
jgi|Dicpu1|93523|estExt_fgeneshDP_pm.C_120017 External link yd SF
  yd PF No hits
jgi|Dicpu1|96504|estExt_fgeneshDP_pg.C_140032 External link yd SF No hits
  yd PF
jgi|Dicpu1|92931|estExt_fgeneshDP_kg.C_3700001 External link yd SF No hits
  yd PF
jgi|Dicpu1|93022|estExt_fgeneshDP_kg.C_4110001 External link yd SF No hits
  yd PF