DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Dictyostelium purpureum
Taxonomy: Eukaryota; Mycetozoa; Dictyosteliida; Dictyostelium
source (downloaded: 2008-08-19)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Dicpu1|41441|e_gw1.390.5.1 External link yd SF No hits
  yd PF
jgi|Dicpu1|149168|GID1.0039857 External link yd SF No hits
  yd PF
jgi|Dicpu1|91709|estExt_fgeneshDP_kg.C_700003 External link yd SF No hits
  yd PF
jgi|Dicpu1|73943|fgeneshDP_pg.C_scaffold_1000106 External link yd SF No hits
  yd PF
jgi|Dicpu1|75611|fgeneshDP_pg.C_scaffold_28000047 External link yd SF No hits
  yd PF
jgi|Dicpu1|152822|GID1.0043511 External link yd SF No hits
  yd PF
jgi|Dicpu1|91761|estExt_fgeneshDP_kg.C_760002 External link yd SF No hits
  yd PF
jgi|Dicpu1|93260|estExt_fgeneshDP_kg.C_6040001 External link yd SF No hits
  yd PF
jgi|Dicpu1|150254|GID1.0040943 External link yd SF No hits
  yd PF
jgi|Dicpu1|13896|gw1.39.46.1 External link yd SF No hits
  yd PF
jgi|Dicpu1|77799|fgeneshDP_pg.C_scaffold_83000019 External link yd SF No hits
  yd PF
jgi|Dicpu1|80206|fgeneshDP_pg.C_scaffold_175000008 External link yd SF No hits
  yd PF
jgi|Dicpu1|86591|fgeneshDP_pm.C_scaffold_39000024 External link yd SF No hits
  yd PF
jgi|Dicpu1|82800|fgeneshDP_pg.C_scaffold_324000006 External link yd SF No hits
  yd PF
jgi|Dicpu1|79220|fgeneshDP_pg.C_scaffold_133000015 External link yd SF No hits
  yd PF
jgi|Dicpu1|25982|e_gw1.8.44.1 External link yd SF No hits
  yd PF
jgi|Dicpu1|96995|estExt_fgeneshDP_pg.C_420041 External link yd SF No hits
  yd PF
jgi|Dicpu1|155139|GID1.0045793 External link yd SF No hits
  yd PF
jgi|Dicpu1|147546|GID1.0038235 External link yd SF No hits
  yd PF
jgi|Dicpu1|153294|GID1.0043983 External link yd SF No hits
  yd PF
jgi|Dicpu1|98369|estExt_fgeneshDP_pg.C_1760014 External link yd SF No hits
  yd PF
jgi|Dicpu1|151912|GID1.0042601 External link yd SF No hits
  yd PF
jgi|Dicpu1|156583|GID1.0047237 External link yd SF No hits
  yd PF