DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Yarrowia lipolytica
Taxonomy: Eukaryota; Fungi; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia
source (downloaded: 2004-07-16)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gnl|GLV|YALI0E23342g External link yl SF
  yl PF
gnl|GLV|YALI0C10010g External link yl SF
  yl PF
gnl|GLV|YALI0B08206g External link yl SF
  yl PF
gnl|GLV|YALI0E31669g External link yl SF
  yl PF
gnl|GLV|YALI0A11517g External link yl SF
  yl PF
gnl|GLV|YALI0E05555g External link yl SF
  yl PF
gnl|GLV|YALI0F17886g External link yl SF
  yl PF
gnl|GLV|YALI0E16577g External link yl SF
  yl PF
gnl|GLV|YALI0E31757g External link yl SF
  yl PF
gnl|GLV|YALI0E02442g External link yl SF
  yl PF No hits
gnl|GLV|YALI0C22682g External link yl SF
  yl PF
gnl|GLV|YALI0D20482g External link yl SF
  yl PF
gnl|GLV|YALI0E10087g External link yl SF
  yl PF
gnl|GLV|YALI0C22990g External link yl SF
  yl PF
gnl|GLV|YALI0D20460g External link yl SF
  yl PF
gnl|GLV|YALI0E18656g External link yl SF
  yl PF
gnl|GLV|YALI0C11858g External link yl SF
  yl PF
gnl|GLV|YALI0E24277g External link yl SF
  yl PF
gnl|GLV|YALI0E01606g External link yl SF
  yl PF
gnl|GLV|YALI0F03135g External link yl SF
  yl PF
gnl|GLV|YALI0F17424g External link yl SF
  yl PF
gnl|GLV|YALI0D17988g External link yl SF
  yl PF
gnl|GLV|YALI0E31383g External link yl SF
  yl PF
gnl|GLV|YALI0C15202g External link yl SF
  yl PF
gnl|GLV|YALI0B04510g External link yl SF
  yl PF
gnl|GLV|YALI0C18667g External link yl SF
  yl PF
gnl|GLV|YALI0D05005g External link yl SF
  yl PF
gnl|GLV|YALI0D14872g External link yl SF
  yl PF
gnl|GLV|YALI0C19063g External link yl SF
  yl PF
gnl|GLV|YALI0D01419g External link yl SF
  yl PF
gnl|GLV|YALI0E03410g External link yl SF
  yl PF
gnl|GLV|YALI0D06193g External link yl SF
  yl PF
gnl|GLV|YALI0B05038g External link yl SF
  yl PF
gnl|GLV|YALI0B15818g External link yl SF
  yl PF
gnl|GLV|YALI0C19151g External link yl SF
  yl PF
gnl|GLV|YALI0F06072g External link yl SF
  yl PF
gnl|GLV|YALI0F17468g External link yl SF
  yl PF
gnl|GLV|YALI0F13695g External link yl SF
  yl PF
gnl|GLV|YALI0D02783g External link yl SF
  yl PF
gnl|GLV|YALI0A10637g External link yl SF
  yl PF
gnl|GLV|YALI0D02475g External link yl SF
  yl PF
gnl|GLV|YALI0D12628g External link yl SF
  yl PF
gnl|GLV|YALI0D13904g External link yl SF
  yl PF
gnl|GLV|YALI0E18304g External link yl SF
  yl PF
gnl|GLV|YALI0D20394g External link yl SF
  yl PF
gnl|GLV|YALI0C18645g External link yl SF
  yl PF
gnl|GLV|YALI0D23045g External link yl SF
  yl PF
gnl|GLV|YALI0E10681g External link yl SF
  yl PF
gnl|GLV|YALI0F16599g External link yl SF
  yl PF
gnl|GLV|YALI0D01353g External link yl SF
  yl PF