DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|127514168|ref|YP_001095365.1| External link 1r SF
  1r PF
gi|158424917|ref|YP_001526209.1| External link 75 SF
  75 PF
gi|77920676|ref|YP_358491.1| External link p8 SF
  p8 PF
gi|28872653|ref|NP_795272.1| External link pj SF
  pj PF
gi|52787713|ref|YP_093542.1| External link lc SF
  lc PF
gi|194365916|ref|YP_002028526.1| External link e9 SF
  e9 PF
gi|162147030|ref|YP_001601491.1| External link 7c SF
  7c PF
gi|134292666|ref|YP_001116402.1| External link 30 SF
  30 PF
gi|119870771|ref|YP_940723.1| External link 46 SF
  46 PF
gi|171058327|ref|YP_001790676.1| External link 7i SF
  7i PF
gi|121596299|ref|YP_988195.1| External link 43 SF
  43 PF
gi|152967275|ref|YP_001363059.1| External link 58 SF
  58 PF
gi|13475513|ref|NP_107077.1| External link mk SF
  mk PF
gi|167623987|ref|YP_001674281.1| External link 8l SF
  8l PF
gi|161521623|ref|YP_001585050.1| External link 76 SF
  76 PF
gi|113868997|ref|YP_727486.1| External link 2j SF
  2j PF
27472.m000312 External link rk SF
  rk PF
gi|109898413|ref|YP_661668.1| External link px SF
  px PF
gi|24372994|ref|NP_717036.1| External link sl SF
  sl PF
gi|158421818|ref|YP_001523110.1| External link 75 SF
  75 PF
gi|126437601|ref|YP_001073292.1| External link 22 SF
  22 PF
gi|163846785|ref|YP_001634829.1| External link 6w SF
  6w PF
gi|94311812|ref|YP_585022.1| External link r4 SF
  r4 PF
gi|83309996|ref|YP_420260.1| External link m5 SF
  m5 PF
gi|108801617|ref|YP_641814.1| External link yb SF
  yb PF
gi|86605898|ref|YP_474661.1| External link cg SF
  cg PF
gi|194290603|ref|YP_002006510.1| External link 9x SF
  9x PF
gi|73542427|ref|YP_296947.1| External link rl SF
  rl PF
gi|52082321|ref|YP_081112.1| External link lf SF
  lf PF
gi|114328570|ref|YP_745727.1| External link 3m SF
  3m PF
gi|86358374|ref|YP_470266.1| External link rz SF
  rz PF
gi|26991917|ref|NP_747342.1| External link ps SF
  ps PF
gi|148550351|ref|YP_001270453.1| External link 0a SF
  0a PF
gi|78188199|ref|YP_378537.1| External link c5 SF
  c5 PF