DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
ENSMUSP00000085416 External link mh SF
Gene name: Ncoa3  mh PF
ENSOPRP00000013751 External link ow SF
  ow PF
ENSMUSP00000085416 External link mm SF
Gene name: Ncoa3  mm PF
ENSMUSP00000104875 External link mm SF
  mm PF
ENSTRUP00000012342 External link to SF
  to PF
ENSTRUP00000029758 External link to SF
  to PF
ENSMUSP00000096681 External link mm SF
  mm PF
ENSOPRP00000013751 External link oq SF
  oq PF
jgi|Dappu1|194123|estExt_Genewise1Plus.C_110191 External link d7 SF
  d7 PF
ENSTRUP00000002206 External link tq SF
  tq PF
jgi|Lotgi1|127403|e_gw1.57.263.1 External link gy SF
  gy PF
FBpp0082178 External link dd SF
  dd PF
PHUM001568-PA hv SF
  hv PF
ENSDARP00000060666 External link da SF
  da PF
FBpp0240563 External link gw SF
  gw PF
jgi|Lotgi1|235614|estExt_fgenesh2_pg.C_sca_670068 External link gy SF
  gy PF No hits
FBpp0082178 External link dm SF
  dm PF
FBpp0271256 External link dy SF
  dy PF
ENSMODP00000011291 External link oo SF
  oo PF
ENSTRUP00000002206 External link to SF
  to PF
AGAP000056-PA External link ag SF
  ag PF
ENSMODP00000011291 External link op SF
  op PF
FBpp0137991 External link ge SF
  ge PF
gi|156549096|ref|XP_001607569.1| External link nz SF
  nz PF
jgi|Nemve1|96877|e_gw.44.108.1 External link nw SF
  nw PF
PHUM000715-PA hv SF
  hv PF
CG7771-PA External link dn SF
Gene name: sim  dn PF
jgi|Helro1|63031 External link hx SF
  hx PF
FBpp0172586 External link dx SF
  dx PF
ENSDARP00000003984 External link da SF
  da PF
ENSRNOP00000002294 External link ro SF
  ro PF
ENSAPMP00000022857 External link ai SF
  ai PF
ENSLAFP00000000102 External link l1 SF
  l1 PF
AGAP010259-PB External link ag SF
  ag PF
ENSTRUP00000006976 External link to SF
  to PF
Translation:3859 ie SF
  ie PF
FBpp0157654 External link gd SF
  gd PF
FBpp0082178 External link de SF
  de PF
AGAP000056-PA External link ah SF
  ah PF
ENSDARP00000003984 External link df SF
  df PF
jgi|Dappu1|42139|e_gw1.4.373.1 External link d7 SF
  d7 PF
AAEL011825-PC External link ax SF
  ax PF
FBpp0217285 External link dw SF
  dw PF
jgi|Capca1|165634|estExt_Genewise1.C_40076 External link i1 SF
  i1 PF
ENSOCUP00000013812 External link o3 SF
  o3 PF
AAEL011825-PA External link ax SF
  ax PF
gi|115696840|ref|XP_780848.2| External link tu SF
  tu PF
jgi|Dappu1|59022|e_gw1.77.82.1 External link d7 SF
  d7 PF
FBpp0082179 External link dd SF
  dd PF
ENSOCUP00000013812 External link ok SF
  ok PF