DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Lotgi1|225709|estExt_Genewise1Plus.C_sca_1480073 External link gy SF
  gy PF
jgi|Helro1|135646 External link hx SF
  hx PF
ENSCPOP00000014082 External link gu SF
  gu PF
ENSTRUP00000004920 External link to SF
  to PF
ENSORLP00000018302 External link ol SF
  ol PF
ENSFCAP00000007973 External link f1 SF
  f1 PF
gi|49114879|gb|AAH72770| External link xl SF
  xl PF
jgi|Lotgi1|89896|gw1.26.399.1 External link gy SF
  gy PF
ENSOCUP00000000171 External link ok SF
  ok PF
ENSXETP00000047681 External link xn SF
  xn PF
ENSMUSP00000069616 External link mh SF
Gene name: Egr1  mh PF
ENSAPMP00000016943 External link aj SF
  aj PF
ENSPPYP00000020651 External link of SF
  of PF
ENSOCUP00000000171 External link o3 SF
  o3 PF
C27C12.2 External link cz SF
Gene name: CE20531  cz PF
ENSDARP00000062854 External link df SF
  df PF
gi|148235210|ref|NP_001083863| External link xl SF
  xl PF
ENSEEUP00000002547 External link e4 SF
  e4 PF
ENSOPRP00000008943 External link oq SF
  oq PF
ENSCAFP00000019211 External link di SF
  di PF
ENSETEP00000014405 External link ee SF
  ee PF
CBP03714 External link cw SF
  cw PF
jgi|Nemve1|39805|gw.4.400.1 External link nw SF
  nw PF
ENSORLP00000000939 External link o1 SF
  o1 PF
ENSDARP00000072456 External link da SF
  da PF
ENSMMUP00000013428 External link ru SF
  ru PF
ENSORLP00000013777 External link ol SF
  ol PF
ENSORLP00000006860 External link o1 SF
  o1 PF
ENSMICP00000000789 External link io SF
  io PF
ENSMMUP00000013427 External link ru SF
  ru PF
gi|156539827|ref|XP_001601362.1| External link nz SF
  nz PF
ENSPTRP00000034368 External link xq SF
  xq PF
ENSRNOP00000026303 External link rn SF
  rn PF
ENSTRUP00000002343 External link to SF
  to PF
ENSTRUP00000004920 External link tq SF
  tq PF
gi|385331|gb|AAB25681| External link xl SF
  xl PF
ENSMODP00000015174 External link op SF
  op PF
ENSXETP00000047681 External link xk SF
  xk PF
ENSRNOP00000000792 External link ro SF
  ro PF
ENSECAP00000021177 External link e5 SF
  e5 PF
29087.m001029 hz SF
  hz PF
ENSTRUP00000001570 External link tq SF
  tq PF
ENSBTAP00000013284 External link bv SF
  bv PF
FBpp0141183 External link ge SF
  ge PF
ENSPTRP00000029562 External link xq SF
  xq PF
FBpp0082966 External link de SF
  de PF
FBpp0082967 External link dm SF
  dm PF
ENSBTAP00000013284 External link bw SF
  bw PF
ENSTRUP00000001570 External link to SF
  to PF
ENSXETP00000014656 External link xn SF
  xn PF