DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Monbr1|33265|estExt_fgenesh2_pg.C_170131 External link ov SF
  ov PF
84761.m00040 External link tx SF
  tx PF
ENSPTRP00000008649 External link xp SF
  xp PF
ENSLAFP00000012425 External link l1 SF
  l1 PF
ENSMUSP00000096734 External link mm SF
  mm PF
ENSGACP00000016727 External link g1 SF
  g1 PF
ENSP00000377591 External link hs SF
  hs PF
ENSCAFP00000000152 External link di SF
  di PF
ENSBTAP00000019562 External link bv SF
  bv PF
ENSRNOP00000058649 External link rn SF
  rn PF
ENSPTRP00000008650 External link xp SF
  xp PF
ENSORLP00000019895 External link ol SF
  ol PF
ENSCAFP00000000152 External link dg SF
  dg PF
ENSBTAP00000019563 External link bw SF
  bw PF
ENSTRUP00000005291 External link to SF
  to PF
ENSP00000302919 External link hs SF
Gene name: SMARCC2  hs PF
gi|48734804|gb|AAH72147| External link xl SF
  xl PF
ENSMICP00000013183 External link io SF
  io PF
ENSECAP00000004598 External link eq SF
  eq PF
ENSMMUP00000012240 External link r2 SF
  r2 PF
ENSP00000267064 External link ht SF
  ht PF
ENSBTAP00000042211 External link bv SF
  bv PF
ENSMLUP00000006058 External link l2 SF
  l2 PF
ENSMUSP00000100868 External link mh SF
  mh PF
ENSP00000254480 External link hs SF
  hs PF
ENSXETP00000020938 External link xn SF
  xn PF
ENSRNOP00000028244 External link rn SF
  rn PF
jgi|Triad1|31063|e_gw1.16.151.1 External link rq SF
  rq PF
ENSMMUP00000012240 External link ru SF
  ru PF
ENSMICP00000013183 External link i2 SF
  i2 PF
ENSP00000254480 External link ht SF
  ht PF
ENSXETP00000020938 External link xk SF
  xk PF
ENSPTRP00000008650 External link xq SF
  xq PF
ENSECAP00000006611 External link eq SF
  eq PF
ENSECAP00000006611 External link e5 SF
  e5 PF
ENSMUSP00000026433 External link mm SF
Gene name: Smarcc2  mm PF
gi|147900482|ref|NP_001085396| External link xl SF
  xl PF
ENSRNOP00000058649 External link ro SF
  ro PF
ENSTRUP00000005290 External link to SF
  to PF
ENSMUSP00000100868 External link mm SF
  mm PF
ENSGACP00000016727 External link gc SF
  gc PF
ENSORLP00000019895 External link o1 SF
  o1 PF
ENSECAP00000018632 External link e5 SF
  e5 PF
ENSECAP00000004598 External link e5 SF
  e5 PF
ENSECAP00000018632 External link eq SF
  eq PF
ENSP00000267064 External link hs SF
  hs PF
ENSMLUP00000006058 External link lu SF
  lu PF
ENSBTAP00000019563 External link bv SF
  bv PF
ENSLAFP00000012425 External link lk SF
  lk PF
137135 External link sj SF
  sj PF