DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
29739.m003684 External link rk SF
  rk PF
jgi|Selmo1|411161|fgenesh2_pg.C_scaffold_14000214 External link gj SF
  gj PF
gi|115944326|ref|XP_001192011.1| External link tu SF
  tu PF
gi|115814663|ref|XP_001199252.1| External link tu SF
  tu PF
jgi|Phybl1|69961|fgeneshPB_pg.31__12 External link hn SF
  hn PF
AC187046.3_FGT012 External link ze SF
  ze PF
gi|156548760|ref|XP_001604444.1| External link nz SF
  nz PF
scaffold_1000.1 External link nk SF
  nk PF
LELG_04654 ly SF
  ly PF
ENSFCAP00000003358 External link f1 SF
  f1 PF
ENSFCAP00000003358 External link fe SF
  fe PF
ENSOGAP00000006440 External link o4 SF
  o4 PF
ENSOCUP00000005169 External link o3 SF
  o3 PF
ENSSTOP00000011417 External link g3 SF
  g3 PF
ENSGACP00000020073 External link gc SF
  gc PF
ENSGACP00000020073 External link g1 SF
  g1 PF
ENSMLUP00000011555 External link lu SF
  lu PF
ENSOCUP00000005169 External link ok SF
  ok PF
ENSSTOP00000011417 External link gb SF
  gb PF
ENSOGAP00000006440 External link ob SF
  ob PF
ENSMLUP00000011555 External link l2 SF
  l2 PF
ENSOANP00000019044 External link o2 SF
  o2 PF
ENSMUSP00000080413 External link mm SF
Gene name: Ncoa2  mm PF
ENSORLP00000015195 External link o1 SF
  o1 PF
ENSMODP00000020305 External link op SF
  op PF
ENSTRUP00000029760 External link to SF
  to PF
ENSDNOP00000011249 External link d6 SF
  d6 PF
ENSRNOP00000011026 External link rn SF
  rn PF
ENSTRUP00000010585 External link to SF
  to PF
ENSTRUP00000016272 External link to SF
  to PF
ENSTRUP00000029759 External link to SF
  to PF
ENSTRUP00000010583 External link tq SF
  tq PF
ENSTRUP00000029757 External link to SF
  to PF
ENSTRUP00000010583 External link to SF
  to PF
ENSOANP00000019045 External link oh SF
  oh PF
ENSTRUP00000029756 External link to SF
  to PF
ENSMODP00000020305 External link oo SF
  oo PF
ENSP00000267974 External link ht SF
Gene name: NCOA2  ht PF
ENSP00000267974 External link hs SF
Gene name: NCOA2  hs PF
ENSMICP00000006203 External link io SF
  io PF
ENSECAP00000006796 External link eq SF
  eq PF
ENSMUSP00000006037 External link mh SF
  mh PF
ENSMICP00000006203 External link i2 SF
  i2 PF
ENSMODP00000029083 External link op SF
  op PF
ENSBTAP00000027071 External link bv SF
  bv PF
ENSDARP00000024999 External link da SF
  da PF
ENSTRUP00000010584 External link to SF
  to PF
ENSGALP00000025117 External link gh SF
  gh PF
ENSMODP00000029081 External link op SF
  op PF
ENSORLP00000010164 External link ol SF
  ol PF