DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|119871924|ref|YP_929931.1| External link 34 SF
  34 PF
gi|162448892|ref|YP_001611259.1| External link 60 SF
  60 PF
gi|108761825|ref|YP_633731.1| External link m1 SF
  m1 PF
gi|54027463|ref|YP_121705.1| External link nf SF
  nf PF
gi|162450781|ref|YP_001613148.1| External link 60 SF
  60 PF
gi|108758699|ref|YP_628542.1| External link m1 SF
  m1 PF
gi|150389363|ref|YP_001319412.1| External link 0n SF
  0n PF
gi|83309267|ref|YP_419531.1| External link m5 SF
  m5 PF
gi|146343555|ref|YP_001208603.1| External link 26 SF
  26 PF
gi|111221926|ref|YP_712720.1| External link 1b SF
  1b PF
gi|91975357|ref|YP_568016.1| External link rr SF
  rr PF
gi|86751755|ref|YP_488251.1| External link rj SF
  rj PF
gi|27376187|ref|NP_767716.1| External link bj SF
  bj PF
gi|157147596|ref|YP_001454915.1| External link 5x SF
  5x PF
gi|157368913|ref|YP_001476902.1| External link 7e SF
  7e PF
gi|152973309|ref|YP_001338455.1| External link 2k SF
  2k PF
gi|146310213|ref|YP_001175287.1| External link 08 SF
  08 PF
gi|88657833|ref|YP_507799.1| External link eg SF
  eg PF
gi|88606714|ref|YP_505648.1| External link as SF
  as PF
gi|57234348|ref|YP_181599.1| External link et SF
  et PF
gi|56417081|ref|YP_154155.1| External link am SF
  am PF
gi|161831001|ref|YP_001597255.1| External link 5w SF
  5w PF
gi|195953192|ref|YP_002121482.1| External link e8 SF
  e8 PF
gi|146318705|ref|YP_001198417.1| External link 4r SF
  4r PF
gi|147669434|ref|YP_001214252.1| External link 10 SF
  10 PF
gi|29654708|ref|NP_820400.1| External link cx SF
  cx PF
gi|22536726|ref|NP_687577.1| External link s4 SF
  s4 PF
gi|62179766|ref|YP_216183.1| External link x6 SF
  x6 PF
gi|73667431|ref|YP_303447.1| External link el SF
  el PF
gi|116512114|ref|YP_809330.1| External link 4o SF
  4o PF
gi|19746277|ref|NP_607413.1| External link sx SF
  sx PF
gi|154706839|ref|YP_001423989.1| External link 2n SF
  2n PF
gi|16764259|ref|NP_459874.1| External link su SF
  su PF
gi|125624033|ref|YP_001032516.1| External link 39 SF
  39 PF
gi|57239512|ref|YP_180648.1| External link eh SF
  eh PF
gi|57234968|ref|YP_180999.1| External link et SF
  et PF
gi|147668729|ref|YP_001213547.1| External link 10 SF
  10 PF
gi|58617547|ref|YP_196746.1| External link ea SF
  ea PF
gi|73748675|ref|YP_307914.1| External link dl SF
  dl PF
gi|146320914|ref|YP_001200625.1| External link 2h SF
  2h PF
gi|85060022|ref|YP_455724.1| External link og SF
  og PF
gi|58579494|ref|YP_197706.1| External link ei SF
  ei PF
gi|57234921|ref|YP_181022.1| External link et SF
  et PF
gi|57234333|ref|YP_181610.1| External link et SF
  et PF
gi|18313906|ref|NP_560573.1| External link pc SF
  pc PF
gi|126459405|ref|YP_001055683.1| External link 4u SF
  4u PF No hits
gi|126438464|ref|YP_001060149.1| External link 36 SF
  36 PF
gi|16129260|ref|NP_415815.1| External link ec SF
Gene name: ycjC  ec PF
gi|91778751|ref|YP_553959.1| External link b4 SF
  b4 PF
gi|110677441|ref|YP_680448.1| External link 2r SF
  2r PF