DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|111220376|ref|YP_711170.1| External link 1b SF
  1b PF
gi|24378700|ref|NP_720655.1| External link s6 SF
  s6 PF
gi|119715026|ref|YP_921991.1| External link 0j SF
  0j PF
gi|19551873|ref|NP_599875.1| External link c3 SF
  c3 PF
gi|28493079|ref|NP_787240.1| External link tw SF
  tw PF
gi|145296525|ref|YP_001139346.1| External link 4e SF
  4e PF
gi|50841968|ref|YP_055195.1| External link ac SF
  ac PF
gi|156740126|ref|YP_001430255.1| External link 77 SF
  77 PF
gi|117927400|ref|YP_871951.1| External link 3q SF
  3q PF
gi|145295825|ref|YP_001138646.1| External link 4e SF
  4e PF
gi|182436865|ref|YP_001824584.1| External link 7n SF
  7n PF
gi|148823900|ref|YP_001288654.1| External link 51 SF
  51 PF
gi|62389532|ref|YP_224934.1| External link cb SF
  cb PF
gi|118618674|ref|YP_907006.1| External link 5o SF
  5o PF
gi|15842326|ref|NP_337363.1| External link mu SF
  mu PF
gi|193214651|ref|YP_001995850.1| External link 9o SF
  9o PF
gi|169235473|ref|YP_001688673.1| External link 8m SF
  8m PF
gi|148658625|ref|YP_001278830.1| External link 4a SF
  4a PF
gi|38233226|ref|NP_938993.1| External link cd SF
  cd PF
gi|111023611|ref|YP_706583.1| External link 3r SF
  3r PF
gi|126434751|ref|YP_001070442.1| External link 22 SF
  22 PF
gi|183982016|ref|YP_001850307.1| External link 8u SF
  8u PF
gi|15827486|ref|NP_301749.1| External link ml SF
  ml PF
gi|21674552|ref|NP_662617.1| External link ch SF
  ch PF
gi|76802081|ref|YP_327089.1| External link np SF
  np PF
gi|146321938|ref|YP_001201649.1| External link 2h SF
  2h PF
gi|15609848|ref|NP_217227.1| External link mb SF
  mb PF
gi|145294810|ref|YP_001137631.1| External link 4e SF
  4e PF
gi|21222420|ref|NP_628199.1| External link sf SF
  sf PF
gi|68536571|ref|YP_251276.1| External link jk SF
  jk PF
gi|120403338|ref|YP_953167.1| External link 28 SF
  28 PF
gi|29830398|ref|NP_825032.1| External link s9 SF
  s9 PF
gi|72162065|ref|YP_289722.1| External link tf SF
  tf PF
gi|38233999|ref|NP_939766.1| External link cd SF
  cd PF
gi|169630192|ref|YP_001703841.1| External link 8c SF
  8c PF
gi|25027207|ref|NP_737261.1| External link co SF
  co PF
gi|147920271|ref|YP_685959.1| External link 3n SF
  3n PF
gi|68536174|ref|YP_250879.1| External link jk SF
  jk PF
gi|116669359|ref|YP_830292.1| External link 1f SF
  1f PF
gi|148662552|ref|YP_001284075.1| External link 4q SF
  4q PF
gi|194333419|ref|YP_002015279.1| External link ed SF
  ed PF
gi|118465346|ref|YP_882781.1| External link 59 SF
  59 PF
gi|148662630|ref|YP_001284153.1| External link 4q SF
  4q PF
gi|108799064|ref|YP_639261.1| External link yb SF
  yb PF
gi|118468273|ref|YP_887081.1| External link 3e SF
  3e PF
gi|183981933|ref|YP_001850224.1| External link 8u SF
  8u PF
gi|86739140|ref|YP_479540.1| External link fk SF
  fk PF
gi|21222784|ref|NP_628563.1| External link sf SF
  sf PF
gi|19553124|ref|NP_601126.1| External link c3 SF
  c3 PF
gi|15789756|ref|NP_279580.1| External link hb SF
  hb PF