DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Ribbon-helix-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
gi|110807309|ref|YP_690829.1| External link 3s SF
  3s PF
gi|56480351|ref|NP_709252.2| External link s0 SF
  s0 PF
gi|62181161|ref|YP_217578.1| External link x6 SF
  x6 PF
gi|91211650|ref|YP_541636.1| External link e2 SF
  e2 PF
gi|37524707|ref|NP_928051.1| External link pd SF
  pd PF
gi|15833610|ref|NP_312383.1| External link eo SF
  eo PF
gi|169632825|ref|YP_001706561.1| External link 7l SF
  7l PF
gi|153950316|ref|YP_001401182.1| External link 06 SF
  06 PF
gi|170682114|ref|YP_001745739.1| External link 8k SF
  8k PF
gi|50085283|ref|YP_046793.1| External link ab SF
  ab PF
gi|74314082|ref|YP_312501.1| External link on SF
  on PF
gi|30065241|ref|NP_839412.1| External link fs SF
  fs PF
gi|157156731|ref|YP_001464949.1| External link 6l SF
  6l PF
gi|160897567|ref|YP_001563149.1| External link 7d SF
  7d PF
gi|15804019|ref|NP_290055.1| External link e1 SF
  e1 PF
gi|66044775|ref|YP_234616.1| External link ud SF
  ud PF
gi|170682114|ref|YP_001745739.1| External link 9t SF
  9t PF
gi|82545845|ref|YP_409792.1| External link sq SF
  sq PF