DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
scaffold_618.4 External link nk SF
  nk PF
jgi|ChlNC64A_1|56599|estExt_fgenesh3_pg.C_10352 External link h2 SF
  h2 PF
ENSTRUP00000021947 External link tq SF
  tq PF
ENSTRUP00000021947 External link to SF
  to PF
scaffold_312.20 External link nk SF
  nk PF
FBpp0246047 External link gw SF
  gw PF
FBpp0280447 External link do SF
  do PF
jgi|Brafl1|125331|estExt_fgenesh2_pg.C_1780033 External link bf SF
  bf PF
ENSXETP00000001419 External link xk SF
  xk PF
FBpp0227565 External link du SF
  du PF
gi|115935366|ref|XP_001186323.1| External link tu SF
  tu PF
ENSMUSP00000028003 External link mm SF
Gene name: Lmx1a  mm PF
ENSMUSP00000000253 External link mh SF
Gene name: Lhx2  mh PF
ENSPPYP00000009230 External link o5 SF
  o5 PF
ENSMMUP00000008291 External link ru SF
  ru PF
ENSOGAP00000003672 External link ob SF
  ob PF
ENSCSAVP00000001628 External link c0 SF
  c0 PF
ENSPPYP00000009230 External link of SF
  of PF
FBpp0117035 External link dk SF
  dk PF
ENSPPYP00000021954 External link of SF
  of PF
ENSDARP00000016866 External link da SF
  da PF
ENSECAP00000007318 External link e5 SF
  e5 PF
ENSCINP00000025882 External link is SF
  is PF
ENSEEUP00000002586 External link ek SF
  ek PF
ENSFCAP00000001680 External link fe SF
  fe PF
ENSETEP00000010252 External link ee SF
  ee PF
ENSLAFP00000005373 External link l1 SF
  l1 PF
AAEL011247-PA External link a4 SF
  a4 PF
jgi|Brafl1|144084|gw.94.22.1 External link bf SF
  bf PF
ENSDNOP00000014827 External link d6 SF
  d6 PF
ENSOGAP00000012351 External link ob SF
  ob PF
ENSOGAP00000003672 External link o4 SF
  o4 PF
Translation:6033 ie SF
  ie PF
FBpp0249672 External link gw SF
  gw PF
FBpp0134118 External link ge SF
  ge PF
ENSPPYP00000021980 External link of SF
  of PF
ENSGACP00000019748 External link g1 SF
  g1 PF
ENSDARP00000006532 External link df SF
  df PF
FBpp0208754 External link dw SF
  dw PF
ENSDNOP00000014827 External link d5 SF
  d5 PF
ENSPTRP00000036487 External link xp SF
  xp PF
ENSCAFP00000029908 External link dg SF
  dg PF
jgi|Triad1|30033|e_gw1.12.56.1 External link rq SF
  rq PF
CBP09607 External link cw SF
  cw PF
ENSOANP00000012025 External link oh SF
  oh PF
FBpp0264453 External link dy SF
  dy PF
AGAP011134-PA External link ag SF
  ag PF
ENSDARP00000029550 External link df SF
  df PF
ENSPTRP00000036487 External link xq SF
  xq PF
FBpp0197978 External link dz SF
  dz PF