DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
scaffold_450.2 External link nk SF
  nk PF
AT4G29940.1 External link ad SF
  ad PF
AT4G29940.1 External link at SF
  at PF
AT3G19510.1 External link ad SF
  ad PF
jgi|MicpuN2|63537|EuGene.1300010187 External link ij SF
  ij PF
AT3G19510.1 External link at SF
  at PF
jgi|Selmo1|438630|estExt_fgenesh2_pg.C_30602 External link gj SF
  gj PF
jgi|Helro1|70524 External link hx SF
  hx PF
Translation:7191 ie SF
  ie PF
ENSCSAVP00000001063 External link i0 SF
  i0 PF
ENSCINP00000018415 External link it SF
  it PF
ENSCSAVP00000001063 External link c0 SF
  c0 PF
ENSCINP00000018415 External link is SF
  is PF
jgi|Emihu1|468407|estExtDG_fgeneshEH_pg.C_1870007 External link ex SF
  ex PF
scaffold_507.1 External link nk SF
  nk PF
ENSP00000362103 External link hs SF
  hs PF
ENSBTAP00000015990 External link bv SF
  bv PF
ENSMODP00000001844 External link oo SF
  oo PF
ENSXETP00000053884 External link xn SF
  xn PF
ENSMODP00000022086 External link op SF
  op PF
ENSOPRP00000003941 External link oq SF
  oq PF
gi|72005034|ref|XP_786727.1| External link tu SF
  tu PF
ENSMICP00000010493 External link io SF
  io PF
ENSFCAP00000001002 External link fe SF
  fe PF
jgi|Lotgi1|165040|fgenesh2_pg.C_sca_49000049 External link gy SF
  gy PF
ENSMUSP00000100650 External link mh SF
  mh PF
bma1.CDS.243236.0 r0 SF
  r0 PF
ENSP00000362103 External link ht SF
  ht PF
ENSMODP00000001844 External link op SF
  op PF
ENSMUSP00000100650 External link mm SF
  mm PF
ENSMODP00000022086 External link oo SF
  oo PF
ENSOPRP00000003941 External link ow SF
  ow PF
ENSXETP00000053884 External link xk SF
  xk PF
ENSMLUP00000000930 External link l2 SF
  l2 PF
gi|115930551|ref|XP_001194891.1| External link tu SF
  tu PF
ENSBTAP00000015990 External link bw SF
  bw PF
ENSMICP00000010493 External link i2 SF
  i2 PF
ENSMLUP00000000930 External link lu SF
  lu PF
ENSFCAP00000001002 External link f1 SF
  f1 PF
jgi|Emihu1|96740|fgeneshEH_pg.7__113 External link ex SF
  ex PF
jgi|Trive1|10897|gw1.10.409.1 External link nj SF
  nj PF No hits
ENSOGAP00000009745 External link o4 SF
  o4 PF
ENSOGAP00000009745 External link ob SF
  ob PF
ENSGALP00000001007 External link gh SF
  gh PF
ENSMMUP00000027691 External link ru SF
  ru PF
ENSDNOP00000008060 External link d5 SF
  d5 PF
ENSRNOP00000011641 External link rn SF
  rn PF
gi|115949932|ref|XP_001192612.1| External link tu SF
  tu PF
ENSP00000382394 External link ht SF
  ht PF
ENSBTAP00000027021 External link bv SF
  bv PF