DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSPPYP00000016789 External link o5 SF
  o5 PF
ENSPPYP00000016789 External link of SF
  of PF
ENSPTRP00000028170 External link xq SF
  xq PF
ENSP00000264808 External link hs SF
Gene name: PRDM5  hs PF
ENSP00000264808 External link ht SF
Gene name: PRDM5  ht PF
ENSPTRP00000028170 External link xp SF
  xp PF
jgi|Brafl1|193704|gw.360.80.1 External link bf SF
  bf PF
jgi|Capca1|200699|fgenesh1_pg.C_scaffold_971000006 External link i1 SF
  i1 PF
ENSTRUP00000012758 External link to SF
  to PF
jgi|Brafl1|62643|fgenesh2_pm.scaffold_652000003 External link bf SF
  bf PF
jgi|Brafl1|259771|estExt_GenewiseH_1.C_30347 External link bf SF
  bf PF
jgi|Brafl1|109253|fgenesh2_pg.scaffold_675000016 External link bf SF
  bf PF
jgi|Brafl1|82362|fgenesh2_pg.scaffold_111000017 External link bf SF
  bf PF
jgi|Brafl1|96471|fgenesh2_pg.scaffold_285000031 External link bf SF
  bf PF
jgi|Brafl1|58912|fgenesh2_pm.scaffold_94000014 External link bf SF
  bf PF
gi|115619044|ref|XP_001204297.1| External link tu SF
  tu PF
jgi|Brafl1|277769|estExt_gwp.C_390036 External link bf SF
  bf PF
ENSTRUP00000012764 External link to SF
  to PF
gi|72015157|ref|XP_784091.1| External link tu SF
  tu PF
jgi|Brafl1|57720|fgenesh2_pm.scaffold_32000009 External link bf SF
  bf PF
jgi|Brafl1|277393|estExt_gwp.C_350110 External link bf SF
  bf PF
jgi|Brafl1|136114|gw.69.4.1 External link bf SF
  bf PF
jgi|Brafl1|125176|estExt_fgenesh2_pg.C_1710043 External link bf SF
  bf PF
jgi|Lotgi1|179309|fgenesh2_pm.C_sca_60000015 External link gy SF
  gy PF
jgi|Brafl1|242207|e_gw.407.257.1 External link bf SF
  bf PF
ENSBTAP00000046605 External link bw SF
  bw PF
ENSMODP00000036197 External link op SF
  op PF
jgi|Brafl1|196013|gw.316.247.1 External link bf SF
  bf PF
ENSECAP00000009516 External link e5 SF
  e5 PF
ENSRNOP00000040441 External link rn SF
  rn PF
ENSECAP00000009516 External link eq SF
  eq PF
ENSBTAP00000046605 External link bv SF
  bv PF
FBpp0079847 External link dd SF
  dd PF
FBpp0079847 External link dm SF
  dm PF
jgi|Capca1|187753|fgenesh1_pg.C_scaffold_236000022 External link i1 SF
  i1 PF
jgi|Brafl1|147455|gw.32.69.1 External link bf SF
  bf PF
jgi|Brafl1|58735|fgenesh2_pm.scaffold_81000012 External link bf SF
  bf PF
jgi|Brafl1|213797|e_gw.55.274.1 External link bf SF
  bf PF
ENSBTAP00000016075 External link bv SF
  bv PF
jgi|Capca1|189170|fgenesh1_pg.C_scaffold_231000015 External link i1 SF
  i1 PF
ENSORLP00000020344 External link ol SF
  ol PF
ENSGALP00000019484 External link gg SF
  gg PF
ENSGALP00000019484 External link gh SF
  gh PF
jgi|Capca1|130870|e_gw1.259.19.1 External link i1 SF
  i1 PF
jgi|Capca1|218996|estExt_fgenesh1_pg.C_77830001 External link i1 SF
  i1 PF
ENSP00000374359 External link hs SF
  hs PF
gi|2851464|sp|P03001| External link xl SF
  xl PF
ENSCAFP00000005698 External link dg SF
  dg PF
ENSBTAP00000016732 External link bv SF
  bv PF
gi|147902176|ref|NP_001081328| External link xl SF
  xl PF