DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|94988001|ref|YP_596102.1| External link pk SF
  pk PF
gi|50913737|ref|YP_059709.1| External link sp SF
  sp PF
gi|94989879|ref|YP_597979.1| External link ts SF
  ts PF
gi|160902048|ref|YP_001567629.1| External link 6y SF
  6y PF
gi|116516746|ref|YP_816907.1| External link 47 SF
  47 PF
gi|157150924|ref|YP_001451085.1| External link 6s SF
  6s PF
gi|71910180|ref|YP_281730.1| External link zp SF
  zp PF
gi|116671204|ref|YP_832137.1| External link 1f SF
  1f PF
gi|182415398|ref|YP_001820464.1| External link 8i SF
  8i PF
gi|172039811|ref|YP_001799525.1| External link 7h SF
  7h PF
gi|162447603|ref|YP_001620735.1| External link 8b SF
  8b PF
gi|25011631|ref|NP_736026.1| External link s5 SF
  s5 PF
gi|15674572|ref|NP_268746.1| External link x2 SF
  x2 PF
gi|71903022|ref|YP_279825.1| External link zy SF
  zy PF
gi|27467326|ref|NP_763963.1| External link s3 SF
  s3 PF
gi|90962452|ref|YP_536368.1| External link lv SF
  lv PF
gi|19745579|ref|NP_606715.1| External link sx SF
  sx PF
gi|70727261|ref|YP_254177.1| External link zh SF
  zh PF
gi|28896452|ref|NP_802802.1| External link s8 SF
  s8 PF
gi|169833826|ref|YP_001695028.1| External link 8e SF
  8e PF
gi|116334289|ref|YP_795816.1| External link 52 SF
  52 PF
gi|94993765|ref|YP_601863.1| External link tg SF
  tg PF
gi|73663394|ref|YP_302175.1| External link zt SF
  zt PF
gi|21909853|ref|NP_664121.1| External link s7 SF
  s7 PF
gi|182684582|ref|YP_001836329.1| External link 86 SF
  86 PF
gi|125717132|ref|YP_001034265.1| External link 5b SF
  5b PF
gi|57866185|ref|YP_187889.1| External link ep SF
  ep PF
gi|21227136|ref|NP_633058.1| External link mz SF
  mz PF
gi|194397132|ref|YP_002038254.1| External link 8z SF
  8z PF
gi|126179728|ref|YP_001047693.1| External link 23 SF
  23 PF
gi|184201603|ref|YP_001855810.1| External link 98 SF
  98 PF
gi|15901474|ref|NP_346078.1| External link sr SF
  sr PF
gi|139474306|ref|YP_001129022.1| External link 4z SF
  4z PF
gi|29375587|ref|NP_814741.1| External link ef SF
  ef PF
gi|76787262|ref|YP_330163.1| External link a9 SF
  a9 PF
gi|22537677|ref|NP_688528.1| External link s4 SF
  s4 PF
gi|55980723|ref|YP_144020.1| External link tr SF
  tr PF
gi|119963034|ref|YP_948365.1| External link 56 SF
  56 PF
gi|15903523|ref|NP_359073.1| External link st SF
  st PF
gi|20093126|ref|NP_619201.1| External link ma SF
  ma PF
gi|169235706|ref|YP_001688906.1| External link 8m SF
  8m PF
gi|150400304|ref|YP_001324071.1| External link 57 SF
  57 PF
gi|148379509|ref|YP_001254050.1| External link 0i SF
  0i PF
gi|126465106|ref|YP_001040215.1| External link 0e SF
  0e PF
gi|15789985|ref|NP_279809.1| External link hb SF
  hb PF
gi|156743799|ref|YP_001433928.1| External link 77 SF
  77 PF
gi|15894748|ref|NP_348097.1| External link ca SF
  ca PF
gi|153940452|ref|YP_001390883.1| External link 5c SF
  5c PF
gi|153953707|ref|YP_001394472.1| External link 16 SF
  16 PF
gi|153935390|ref|YP_001387435.1| External link 2u SF
  2u PF