DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|56962224|ref|YP_173947.1| External link x4 SF
  x4 PF
gi|189423671|ref|YP_001950848.1| External link 9z SF
  9z PF
gi|170083438|ref|YP_001732758.1| External link 8n SF
  8n PF
gi|134298046|ref|YP_001111542.1| External link 0c SF
  0c PF
gi|114330259|ref|YP_746481.1| External link 3j SF
  3j PF
gi|82546319|ref|YP_410266.1| External link sq SF
  sq PF
gi|89892961|ref|YP_516448.1| External link d2 SF
  d2 PF
gi|156972596|ref|YP_001443503.1| External link 65 SF
  65 PF
gi|117618897|ref|YP_858465.1| External link 33 SF
  33 PF
gi|169827542|ref|YP_001697700.1| External link 7z SF
  7z PF
gi|91212781|ref|YP_542767.1| External link e2 SF
  e2 PF
gi|29143798|ref|NP_807140.1| External link es SF
  es PF
gi|126176359|ref|YP_001052508.1| External link 2z SF
  2z PF
gi|89110061|ref|AP_003841.1| External link ew SF
  ew PF
gi|45443040|ref|NP_994579.1| External link ye SF
  ye PF
gi|148545722|ref|YP_001265824.1| External link 0a SF
  0a PF
gi|190572356|ref|YP_001970201.1| External link 9i SF
  9i PF
gi|110807828|ref|YP_691348.1| External link 3s SF
  3s PF
gi|153935394|ref|YP_001387035.1| External link 2u SF
  2u PF
gi|29377684|ref|NP_816838.1| External link ef SF
  ef PF
gi|51594628|ref|YP_068819.1| External link yr SF
  yr PF
gi|78045046|ref|YP_361168.1| External link c9 SF
  c9 PF
gi|157377464|ref|YP_001476064.1| External link 6d SF
  6d PF
gi|28210569|ref|NP_781513.1| External link te SF
  te PF
gi|19746334|ref|NP_607470.1| External link sx SF
  sx PF
gi|170723923|ref|YP_001751611.1| External link 8v SF
  8v PF
gi|170682429|ref|YP_001746361.1| External link 8k SF
  8k PF
gi|26250746|ref|NP_756786.1| External link e0 SF
  e0 PF
gi|86158810|ref|YP_465595.1| External link ae SF
  ae PF
gi|16762310|ref|NP_457927.1| External link ty SF
  ty PF
gi|170729025|ref|YP_001763051.1| External link 88 SF
  88 PF
gi|71734061|ref|YP_276722.1| External link qs SF
  qs PF
gi|91776433|ref|YP_546189.1| External link m7 SF
  m7 PF
gi|120553636|ref|YP_957987.1| External link 1n SF
  1n PF
gi|94994605|ref|YP_602703.1| External link tg SF
  tg PF
gi|110802589|ref|YP_697990.1| External link 5n SF
  5n PF
gi|55821182|ref|YP_139624.1| External link sd SF
  sd PF
gi|153932168|ref|YP_001383486.1| External link 3t SF
  3t PF
gi|66770323|ref|YP_245085.1| External link xa SF
  xa PF
gi|170682429|ref|YP_001746361.1| External link 9t SF
  9t PF
gi|192359865|ref|YP_001981191.1| External link 9m SF
  9m PF
gi|153938303|ref|YP_001390471.1| External link 5c SF
  5c PF
gi|194443558|ref|YP_002043395.1| External link 8y SF
  8y PF
gi|156935825|ref|YP_001439741.1| External link 69 SF
  69 PF
gi|182681678|ref|YP_001829838.1| External link 7m SF
  7m PF
gi|161505375|ref|YP_001572487.1| External link 70 SF
  70 PF
gi|123440665|ref|YP_001004658.1| External link 1g SF
  1g PF
gi|148264857|ref|YP_001231563.1| External link 3g SF
  3g PF
gi|15675294|ref|NP_269468.1| External link x2 SF
  x2 PF
gi|22124387|ref|NP_667810.1| External link yk SF
  yk PF