DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|87200409|ref|YP_497666.1| External link nv SF
  nv PF
gi|85374576|ref|YP_458638.1| External link ey SF
  ey PF
gi|83647337|ref|YP_435772.1| External link hc SF
  hc PF
gi|116696487|ref|YP_842063.1| External link 2j SF
  2j PF
gi|171057792|ref|YP_001790141.1| External link 7i SF
  7i PF
gi|66767791|ref|YP_242553.1| External link xa SF
  xa PF
gi|157371782|ref|YP_001479771.1| External link 7e SF
  7e PF
gi|17547224|ref|NP_520626.1| External link rs SF
  rs PF
gi|24374645|ref|NP_718688.1| External link sl SF
  sl PF
gi|94314831|ref|YP_588040.1| External link r4 SF
  r4 PF
gi|172062431|ref|YP_001810082.1| External link 85 SF
  85 PF
gi|92114912|ref|YP_574840.1| External link c8 SF
  c8 PF
gi|161521702|ref|YP_001585129.1| External link 76 SF
  76 PF
gi|78048539|ref|YP_364714.1| External link xv SF
  xv PF
gi|46447468|ref|YP_008833.1| External link p0 SF
  p0 PF
gi|73539138|ref|YP_299505.1| External link rl SF
  rl PF
gi|78063566|ref|YP_373474.1| External link bk SF
  bk PF
gi|58581162|ref|YP_200178.1| External link xo SF
  xo PF
gi|21232083|ref|NP_638000.1| External link xd SF
  xd PF
gi|54301889|ref|YP_131882.1| External link he SF
  he PF
gi|84623086|ref|YP_450458.1| External link xz SF
  xz PF
gi|21243549|ref|NP_643131.1| External link xc SF
  xc PF
jgi|Poptr1_1|796233|fgenesh4_pg.C_scaffold_22094000001 External link pt SF
  pt PF
gi|27383282|ref|NP_774811.1| External link bj SF
  bj PF
gi|15672514|ref|NP_266688.1| External link ll SF
  ll PF
gi|148255508|ref|YP_001240093.1| External link 42 SF
  42 PF
gi|125623366|ref|YP_001031849.1| External link 39 SF
  39 PF
CPAG_03376 i6 SF
  i6 PF
BC1G_13481 b7 SF
  b7 PF
UREG_04337.1 ur SF
  ur PF
CIMG_06036 im SF
  im PF
CIRG_02797 i4 SF
  i4 PF
SS1G_09111.1 lz SF
  lz PF
CISG_05574 i5 SF
  i5 PF
CPSG_01239 i7 SF
  i7 PF
Afu5g06350 External link ao SF
  ao PF
gi|32472101|ref|NP_865095.1| External link pi SF
  pi PF
gi|193215597|ref|YP_001996796.1| External link 9o SF
  9o PF
gi|146307179|ref|YP_001187644.1| External link 4y SF
  4y PF
gi|70730591|ref|YP_260332.1| External link qf SF
  qf PF
gi|77458899|ref|YP_348405.1| External link pn SF
  pn PF
30229.m006223 External link rk SF
  rk PF
gi|152977750|ref|YP_001343379.1| External link 4k SF
  4k PF
gi|73538311|ref|YP_298678.1| External link rl SF
  rl PF
gi|170750337|ref|YP_001756597.1| External link 7w SF
  7w PF
gi|152981191|ref|YP_001354772.1| External link 4d SF
  4d PF
gi|108759503|ref|YP_629919.1| External link m1 SF
  m1 PF
gi|145294653|ref|YP_001137474.1| External link 4e SF
  4e PF
gi|186473799|ref|YP_001861141.1| External link 90 SF
  90 PF
gi|73537785|ref|YP_298152.1| External link rl SF
  rl PF