DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Phypa1_1|75761|fgenesh1_pg.scaffold_55000024 External link pw SF
  pw PF
scaffold_1.101 External link nk SF
  nk PF
ENSRNOP00000012828 External link rn SF
  rn PF
ENSMUSP00000060798 External link mm SF
Gene name: Pou4f1  mm PF
ENSTBEP00000011304 External link tz SF
  tz PF
ENSP00000366413 External link ht SF
  ht PF
ENSP00000366413 External link hs SF
  hs PF
ENSTBEP00000011304 External link t2 SF
  t2 PF
ENSMUSP00000060798 External link mh SF
Gene name: Pou4f1  mh PF
ENSRNOP00000012828 External link ro SF
  ro PF
ENSTRUP00000045115 External link to SF
  to PF
ENSMUSP00000053288 External link mm SF
  mm PF
FBpp0134988 External link ge SF
  ge PF
FBpp0259519 External link dy SF
  dy PF
FBpp0242835 External link gw SF
  gw PF
gi|156538285|ref|XP_001603364.1| External link nz SF
  nz PF
ENSMUSP00000053288 External link mh SF
  mh PF
jgi|Chlre3|186803|estExt_fgenesh2_pg.C_50169 External link cy SF
  cy PF No hits
Translation:9791 ie SF
  ie PF