DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Transcriptional factor tubby, C-terminal domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Ostta4|12951|fgenesh1_pg.C_Chr_11.0001000216 External link ou SF
  ou PF
AC190617.4_FGT003 External link ze SF
  ze PF
AC195787.2_FGT016 External link ze SF
  ze PF
jgi|Sorbi1|5049421|Sb01g035360 External link oj SF
  oj PF
jgi|Sorbi1|5056391|Sb05g003900 External link oj SF
  oj PF
Gm0148x00063 yg SF
  yg PF
jgi|Poptr1_1|798477|fgenesh4_pm.C_LG_II000166 External link pt SF
  pt PF
AT1G25280.1 External link ad SF
  ad PF
evm.TU.supercontig_6.132 r6 SF
  r6 PF
jgi|Sorbi1|5060792|Sb09g025430 External link oj SF
  oj PF
AC190911.3_FGT027 External link ze SF
  ze PF
30170.m014061 External link rk SF
  rk PF
AT1G25280.1 External link at SF
  at PF
Gm0153x00054 yg SF
  yg PF
jgi|Sorbi1|5059365|Sb08g004000 External link oj SF
  oj PF
29634.m002123 External link rk SF
  rk PF
GSVIVP00024911001 vt SF
  vt PF
AC194246.2_FGT009 External link ze SF
  ze PF
LOC_Os11g06420.1|12011.m28739|protein External link os SF
  os PF
Gm0181x00025 yg SF
  yg PF
Gm0111x00018 yg SF
  yg PF
79317 External link ra SF
  ra PF
129492 External link sj SF
  sj PF
130592 External link sj SF
  sj PF
PITG_15195 iy SF
  iy PF
PITG_11466 iy SF
  iy PF
jgi|Selmo1|446625|estExt_fgenesh2_pg.C_740044 External link gj SF
  gj PF
jgi|Sorbi1|5058240|Sb07g000420 External link oj SF
  oj PF
136577 External link sj SF
  sj PF
jgi|Emihu1|110275|fgeneshEH_pg.132__64 External link ex SF
  ex PF
ENSTBEP00000013879 External link tz SF
  tz PF
ENSTBEP00000013879 External link t2 SF
  t2 PF
jgi|Brafl1|216270|e_gw.65.22.1 External link bf SF
  bf PF
ENSOCUP00000001244 External link ok SF
  ok PF No hits
ENSOCUP00000001244 External link o3 SF
  o3 PF No hits
ENSPTRP00000039406 External link xp SF
  xp PF
ENSPTRP00000039406 External link xq SF
  xq PF
ENSORLP00000008597 External link ol SF
  ol PF
jgi|Sorbi1|5042801|Sb06g033820 External link oj SF
  oj PF
LOC_Os08g01290.6|12008.m080055|protein External link os SF
  os PF
ENSFCAP00000011969 External link fe SF
  fe PF
ENSRNOP00000000608 External link rn SF
  rn PF
ENSORLP00000020183 External link o1 SF
  o1 PF
ENSCPOP00000004437 External link gu SF
  gu PF
AGAP011959-PA External link ah SF
  ah PF
ENSMMUP00000006708 External link ru SF
  ru PF
jgi|ChlNC64A_1|58003|estExt_fgenesh3_pg.C_110219 External link h2 SF
  h2 PF
ENSGALP00000009612 External link gg SF
  gg PF
jgi|Batde5|90997|GP3.065560 External link b9 SF
  b9 PF
ENSPTRP00000050549 External link xq SF
  xq PF