DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Nucleic acid-binding proteins.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|85857886|ref|YP_460088.1| External link yt SF
  yt PF
jgi|Auran1|63880 External link a6 SF
  a6 PF
gi|117619984|ref|YP_857934.1| External link 33 SF
  33 PF
gi|15926982|ref|NP_374515.1| External link s2 SF
  s2 PF
gi|28871287|ref|NP_793906.1| External link pj SF
  pj PF
gi|126698954|ref|YP_001087851.1| External link 3x SF
  3x PF
gi|15924392|ref|NP_371926.1| External link sa SF
  sa PF
gi|108811243|ref|YP_647010.1| External link yn SF
  yn PF
gi|148267890|ref|YP_001246833.1| External link 2c SF
  2c PF
gi|161509568|ref|YP_001575227.1| External link 6o SF
  6o PF
gi|54294960|ref|YP_127375.1| External link lg SF
  lg PF
gi|70726510|ref|YP_253424.1| External link zh SF
  zh PF
gi|39995688|ref|NP_951639.1| External link gs SF
  gs PF
gi|169796561|ref|YP_001714354.1| External link 7t SF
  7t PF
gi|162418309|ref|YP_001606346.1| External link 6m SF
  6m PF
gi|70728640|ref|YP_258389.1| External link qf SF
  qf PF
gi|160878713|ref|YP_001557681.1| External link 5z SF
  5z PF
gi|126699599|ref|YP_001088496.1| External link 3x SF
  3x PF
gi|157369425|ref|YP_001477414.1| External link 7e SF
  7e PF
gi|189426235|ref|YP_001953412.1| External link 9z SF
  9z PF
gi|39997003|ref|NP_952954.1| External link gs SF
  gs PF
gi|150393953|ref|YP_001316628.1| External link 1i SF
  1i PF
gi|125624635|ref|YP_001033118.1| External link 39 SF
  39 PF
gi|21283019|ref|NP_646107.1| External link s1 SF
  s1 PF
gi|90021554|ref|YP_527381.1| External link d0 SF
  d0 PF
gi|51595434|ref|YP_069625.1| External link yr SF
  yr PF
gi|148543833|ref|YP_001271203.1| External link 49 SF
  49 PF
gi|70727397|ref|YP_254313.1| External link zh SF
  zh PF
gi|118443638|ref|YP_878429.1| External link 12 SF
  12 PF
gi|49483592|ref|YP_040816.1| External link a0 SF
  a0 PF
gi|116051280|ref|YP_789888.1| External link 2t SF
  2t PF
gi|57866866|ref|YP_188550.1| External link ep SF
  ep PF
gi|28377002|ref|NP_783894.1| External link lb SF
  lb PF
gi|25012091|ref|NP_736486.1| External link s5 SF
  s5 PF
gi|87161577|ref|YP_493992.1| External link a2 SF
  a2 PF
ENSOGAP00000002554 External link ob SF
  ob PF
gi|153948592|ref|YP_001401921.1| External link 06 SF
  06 PF
gi|88195129|ref|YP_499930.1| External link aq SF
  aq PF
gi|148244775|ref|YP_001219469.1| External link 5i SF
  5i PF
gi|192360925|ref|YP_001982618.1| External link 9m SF
  9m PF
gi|118602677|ref|YP_903892.1| External link 5f SF
  5f PF
gi|76788151|ref|YP_330629.1| External link a9 SF
  a9 PF
gi|186894464|ref|YP_001871576.1| External link 9g SF
  9g PF
gi|172057695|ref|YP_001814155.1| External link 7r SF
  7r PF
gi|57651902|ref|YP_186289.1| External link x8 SF
  x8 PF
gi|126699928|ref|YP_001088825.1| External link 3x SF
  3x PF
gi|170025253|ref|YP_001721758.1| External link 8r SF
  8r PF
ENSOGAP00000002554 External link o4 SF
  o4 PF
gi|145599923|ref|YP_001163999.1| External link 5h SF
  5h PF
gi|66047111|ref|YP_236952.1| External link ud SF
  ud PF