DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Ribbon-helix-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|165977363|ref|YP_001652956.1| External link 7y SF
  7y PF
gi|74314443|ref|YP_312862.1| External link on SF
  on PF
gi|127511453|ref|YP_001092650.1| External link 1r SF
  1r PF
gi|59712875|ref|YP_205651.1| External link vf SF
  vf PF
gi|15642677|ref|NP_232310.1| External link vc SF
  vc PF
gi|153949882|ref|YP_001399120.1| External link 06 SF
  06 PF
gi|120600347|ref|YP_964921.1| External link 4g SF
  4g PF
gi|24375544|ref|NP_719587.1| External link sl SF
  sl PF
gi|117922051|ref|YP_871243.1| External link 41 SF
  41 PF
gi|51594462|ref|YP_068653.1| External link yr SF
  yr PF
gi|170718938|ref|YP_001784106.1| External link 7p SF
  7p PF
gi|146313668|ref|YP_001178742.1| External link 08 SF
  08 PF
gi|16762337|ref|NP_457954.1| External link ty SF
  ty PF
gi|152999085|ref|YP_001364766.1| External link 1a SF
  1a PF
gi|145300662|ref|YP_001143503.1| External link 44 SF
  44 PF
gi|167622561|ref|YP_001672855.1| External link 8l SF
  8l PF
gi|186893451|ref|YP_001870563.1| External link 9g SF
  9g PF
gi|170684185|ref|YP_001746325.1| External link 8k SF
  8k PF
gi|52426021|ref|YP_089158.1| External link m3 SF
  m3 PF
gi|152978091|ref|YP_001343720.1| External link 4k SF
  4k PF
gi|113971770|ref|YP_735563.1| External link 0f SF
  0f PF
gi|29143825|ref|NP_807167.1| External link es SF
  es PF
gi|156935929|ref|YP_001439845.1| External link 69 SF
  69 PF
gi|161617239|ref|YP_001591204.1| External link 78 SF
  78 PF
gi|15834121|ref|NP_312894.1| External link eo SF
  eo PF
gi|108806260|ref|YP_650176.1| External link ys SF
  ys PF
gi|119943853|ref|YP_941533.1| External link 0x SF
  0x PF
gi|30064769|ref|NP_838940.1| External link fs SF
  fs PF
gi|145601035|ref|YP_001165111.1| External link 5h SF
  5h PF
gi|123440510|ref|YP_001004504.1| External link 1g SF
  1g PF
gi|45439979|ref|NP_991518.1| External link ye SF
  ye PF
gi|170083408|ref|YP_001732728.1| External link 8n SF
  8n PF
gi|91213480|ref|YP_543466.1| External link e2 SF
  e2 PF
gi|108813901|ref|YP_649668.1| External link yn SF
  yn PF
gi|16272249|ref|NP_438461.1| External link hi SF
  hi PF
gi|162421815|ref|YP_001608117.1| External link 6m SF
  6m PF
gi|117626203|ref|YP_859526.1| External link 1j SF
  1j PF
gi|119776304|ref|YP_929044.1| External link 2p SF
  2p PF
gi|170684185|ref|YP_001746325.1| External link 9t SF
  9t PF
gi|26250705|ref|NP_756745.1| External link e0 SF
  e0 PF
gi|110807798|ref|YP_691318.1| External link 3s SF
  3s PF
gi|170724986|ref|YP_001759012.1| External link 88 SF
  88 PF
gi|157163415|ref|YP_001460733.1| External link 72 SF
  72 PF
gi|22124219|ref|NP_667642.1| External link yk SF
  yk PF
gi|16120460|ref|NP_403773.1| External link yp SF
  yp PF
gi|117619879|ref|YP_855121.1| External link 33 SF
  33 PF
gi|89110091|ref|AP_003871.1| External link ew SF
  ew PF
gi|82546290|ref|YP_410237.1| External link sq SF
  sq PF
gi|85060142|ref|YP_455844.1| External link og SF
  og PF
gi|110644274|ref|YP_672004.1| External link 0m SF
  0m PF