DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Nucleic acid-binding proteins.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|161830524|ref|YP_001597794.1| External link 5w SF
  5w PF
gi|119946330|ref|YP_944010.1| External link 0x SF
  0x PF
gi|153003332|ref|YP_001377657.1| External link 55 SF
  55 PF
gi|75910292|ref|YP_324588.1| External link va SF
  va PF
gi|154706657|ref|YP_001423573.1| External link 2n SF
  2n PF
gi|51244938|ref|YP_064822.1| External link dp SF
  dp PF
gi|116751463|ref|YP_848150.1| External link 0l SF
  0l PF
gi|29653384|ref|NP_819076.1| External link cx SF
  cx PF
gi|110635103|ref|YP_675311.1| External link 0p SF
  0p PF
gi|77165898|ref|YP_344423.1| External link nr SF
  nr PF
gi|74317465|ref|YP_315205.1| External link nt SF
  nt PF No hits
gi|82702034|ref|YP_411600.1| External link nl SF
  nl PF
AT4G36020.1 External link at SF
  at PF
AT4G36020.1 External link ad SF
  ad PF
ENSGALP00000024814 External link gh SF
  gh PF
ENSGALP00000024814 External link gg SF
  gg PF
Gm0231x10006 yg SF
  yg PF
29252.m000273 hz SF
  hz PF
scaffold_16.17 External link nk SF
  nk PF
ENSORLP00000000878 External link ol SF
  ol PF
ENSORLP00000000878 External link o1 SF
  o1 PF
jgi|Capca1|158253|estExt_Genewise1.C_2450043 External link i1 SF
  i1 PF
ENSOANP00000005314 External link oh SF
  oh PF
ENSAPMP00000020246 External link ai SF
  ai PF
ENSPPYP00000001161 External link of SF
  of PF
ENSAPMP00000011364 External link ai SF
  ai PF
jgi|Helro1|104068 External link hx SF
  hx PF
Bmb009536 External link om SF
  om PF
gi|85375609|ref|YP_459671.1| External link ey SF
  ey PF
PHUM002304-PA hv SF
  hv PF
ENSCINP00000026155 External link is SF
  is PF
ENSSTOP00000001500 External link gb SF
  gb PF
AAEL010018-PA External link a4 SF
  a4 PF
AAEL010018-PA External link ax SF
  ax PF
gi|13470456|ref|NP_102024.1| External link mk SF
  mk PF
FBpp0246894 External link gw SF
  gw PF
ENSSTOP00000001500 External link g3 SF
  g3 PF
gi|148273654|ref|YP_001223215.1| External link 32 SF
  32 PF
gi|170728619|ref|YP_001762645.1| External link 88 SF
  88 PF
gi|78221460|ref|YP_383207.1| External link gm SF
  gm PF
gi|119946476|ref|YP_944156.1| External link 0x SF
  0x PF
gi|158321031|ref|YP_001513538.1| External link 68 SF
  68 PF
gi|153954443|ref|YP_001395208.1| External link 16 SF
  16 PF
AGAP004937-PA External link ah SF
  ah PF
gi|170756146|ref|YP_001781321.1| External link 8f SF
  8f PF
gi|16764598|ref|NP_460213.1| External link su SF
  su PF
gi|82752283|ref|YP_418024.1| External link sk SF
  sk PF
gi|29376277|ref|NP_815431.1| External link ef SF
  ef PF
gi|151220973|ref|YP_001331795.1| External link 5p SF
  5p PF
gi|76802455|ref|YP_327463.1| External link np SF
  np PF