DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|117929005|ref|YP_873556.1| External link 3q SF
  3q PF
gi|159037196|ref|YP_001536449.1| External link 61 SF
  61 PF
gi|169834066|ref|YP_001695292.1| External link 8e SF
  8e PF
gi|29376450|ref|NP_815604.1| External link ef SF
  ef PF
30163.m001376 External link rk SF
  rk PF
gi|182437282|ref|YP_001825001.1| External link 7n SF
  7n PF
gi|109896452|ref|YP_659707.1| External link px SF
  px PF
gi|21225818|ref|NP_631597.1| External link sf SF
  sf PF
gi|156979827|ref|YP_001442086.1| External link 71 SF
  71 PF
gi|76818328|ref|YP_337254.1| External link bz SF
  bz PF
gi|29833809|ref|NP_828443.1| External link s9 SF
  s9 PF
gi|160881818|ref|YP_001560786.1| External link 5z SF
  5z PF
gi|146277577|ref|YP_001167736.1| External link 3k SF
  3k PF
gi|116620480|ref|YP_822636.1| External link 25 SF
  25 PF
gi|86356346|ref|YP_468238.1| External link rz SF
  rz PF
gi|186895585|ref|YP_001872697.1| External link 9g SF
  9g PF
gi|85373465|ref|YP_457527.1| External link ey SF
  ey PF
gi|134097068|ref|YP_001102729.1| External link 18 SF
  18 PF
gi|23500709|ref|NP_700149.1| External link br SF
  br PF
gi|119714644|ref|YP_921609.1| External link 0j SF
  0j PF
gi|186474170|ref|YP_001861512.1| External link 90 SF
  90 PF
gi|189025108|ref|YP_001935876.1| External link 91 SF
  91 PF
gi|82545803|ref|YP_409750.1| External link sq SF
  sq PF
gi|56965144|ref|YP_176876.1| External link x4 SF
  x4 PF
gi|158312299|ref|YP_001504807.1| External link 6p SF
  6p PF
gi|16766829|ref|NP_462444.1| External link su SF
Gene name: gntR  su PF
gi|123442320|ref|YP_001006299.1| External link 1g SF
  1g PF
gi|110805593|ref|YP_689113.1| External link 3s SF
  3s PF
gi|90021043|ref|YP_526870.1| External link d0 SF
  d0 PF
gi|52141389|ref|YP_085440.1| External link x5 SF
  x5 PF
gi|134297151|ref|YP_001120886.1| External link 30 SF
  30 PF
gi|162421424|ref|YP_001605626.1| External link 6m SF
  6m PF
gi|152994227|ref|YP_001339062.1| External link 0z SF
  0z PF
gi|117918524|ref|YP_867716.1| External link 41 SF
  41 PF
gi|103486513|ref|YP_616074.1| External link ak SF
  ak PF
gi|145595060|ref|YP_001159357.1| External link 1h SF
  1h PF
gi|77464821|ref|YP_354325.1| External link rh SF
  rh PF
gi|27378505|ref|NP_770034.1| External link bj SF
  bj PF
gi|15901650|ref|NP_346254.1| External link sr SF
  sr PF
gi|25028932|ref|NP_738986.1| External link co SF
  co PF
gi|161503990|ref|YP_001571102.1| External link 70 SF
  70 PF
gi|71733251|ref|YP_274347.1| External link qs SF
  qs PF
gi|157163716|ref|YP_001461034.1| External link 72 SF
  72 PF
gi|189023452|ref|YP_001934220.1| External link 91 SF
  91 PF
gi|123442815|ref|YP_001006791.1| External link 1g SF
  1g PF
gi|82751101|ref|YP_416842.1| External link sk SF
  sk PF
gi|159044575|ref|YP_001533369.1| External link 6q SF
  6q PF
gi|156936280|ref|YP_001440196.1| External link 69 SF
  69 PF
gi|150388423|ref|YP_001318472.1| External link 0n SF
  0n PF
gi|159896830|ref|YP_001543077.1| External link 5u SF
  5u PF