DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Putative DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|42781756|ref|NP_979003.1| External link bx SF
  bx PF No hits
gi|15612971|ref|NP_241274.1| External link bh SF
  bh PF
gi|148378904|ref|YP_001253445.1| External link 0i SF
  0i PF
gi|51892596|ref|YP_075287.1| External link sb SF
  sb PF
gi|150390691|ref|YP_001320740.1| External link 0n SF
  0n PF
gi|119963207|ref|YP_946325.1| External link 56 SF
  56 PF
gi|73748971|ref|YP_308210.1| External link dl SF
  dl PF
gi|22538108|ref|NP_688959.1| External link s4 SF
  s4 PF
gi|25011739|ref|NP_736134.1| External link s5 SF
  s5 PF
gi|148359147|ref|YP_001250354.1| External link 2w SF
  2w PF
gi|15900634|ref|NP_345238.1| External link sr SF
  sr PF
gi|182434734|ref|YP_001822453.1| External link 7n SF
  7n PF
gi|153935389|ref|YP_001386833.1| External link 2u SF
  2u PF
gi|170757408|ref|YP_001780544.1| External link 8f SF
  8f PF
gi|25028563|ref|NP_738617.1| External link co SF
  co PF
gi|160879159|ref|YP_001558127.1| External link 5z SF
  5z PF
gi|25011996|ref|NP_736391.1| External link s5 SF
  s5 PF
gi|76788512|ref|YP_330526.1| External link a9 SF
  a9 PF
gi|118615928|ref|YP_904260.1| External link 5o SF
  5o PF
gi|23097837|ref|NP_691303.1| External link oi SF
  oi PF
gi|56962771|ref|YP_174497.1| External link x4 SF
  x4 PF
gi|73663747|ref|YP_302528.1| External link zt SF
  zt PF
jgi|Batde5|93142|GP3.087010 External link b9 SF
  b9 PF
gi|16802569|ref|NP_464054.1| External link lm SF
  lm PF
gi|170761632|ref|YP_001786298.1| External link 8s SF
  8s PF
gi|150018974|ref|YP_001311228.1| External link 03 SF
  03 PF
gi|163942685|ref|YP_001647569.1| External link 62 SF
  62 PF
gi|182683659|ref|YP_001835406.1| External link 86 SF
  86 PF
gi|118469655|ref|YP_886547.1| External link 3e SF
  3e PF
gi|89056166|ref|YP_511617.1| External link ja SF
  ja PF
gi|187933153|ref|YP_001886050.1| External link 97 SF
  97 PF
gi|194396655|ref|YP_002037385.1| External link 8z SF
  8z PF
gi|146318035|ref|YP_001197747.1| External link 4r SF
  4r PF
gi|110638703|ref|YP_678912.1| External link 37 SF
  37 PF
gi|150391636|ref|YP_001321685.1| External link 0n SF
  0n PF No hits
gi|57233916|ref|YP_181999.1| External link et SF
  et PF
gi|29376251|ref|NP_815405.1| External link ef SF
  ef PF
gi|54297532|ref|YP_123901.1| External link le SF
  le PF
gi|70727290|ref|YP_254206.1| External link zh SF
  zh PF
gi|116871906|ref|YP_848687.1| External link 2g SF
  2g PF
gi|147669738|ref|YP_001214556.1| External link 10 SF
  10 PF
gi|153952994|ref|YP_001393759.1| External link 16 SF
  16 PF
gi|89893762|ref|YP_517249.1| External link d2 SF
  d2 PF
gi|183980044|ref|YP_001848335.1| External link 8u SF
  8u PF
gi|22537795|ref|NP_688646.1| External link s4 SF
  s4 PF
gi|154687960|ref|YP_001423121.1| External link 2o SF
  2o PF
gi|76787676|ref|YP_330269.1| External link a9 SF
  a9 PF
gi|153940149|ref|YP_001390263.1| External link 5c SF
  5c PF
gi|54294343|ref|YP_126758.1| External link lg SF
  lg PF
gi|120402916|ref|YP_952745.1| External link 28 SF
  28 PF