DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|62390284|ref|YP_225686.1| External link cb SF
  cb PF
gi|138895961|ref|YP_001126414.1| External link 1u SF
  1u PF
gi|22538294|ref|NP_689145.1| External link s4 SF
  s4 PF
gi|76788451|ref|YP_329233.1| External link a9 SF
  a9 PF
gi|146321976|ref|YP_001201687.1| External link 2h SF
  2h PF
gi|167040181|ref|YP_001663166.1| External link 8d SF
  8d PF
gi|78186907|ref|YP_374950.1| External link p7 SF
  p7 PF
gi|172040792|ref|YP_001800506.1| External link 7h SF
  7h PF
gi|169833313|ref|YP_001695441.1| External link 8e SF
  8e PF
gi|25012093|ref|NP_736488.1| External link s5 SF
  s5 PF
gi|87160026|ref|YP_494165.1| External link a2 SF
  a2 PF
gi|49483770|ref|YP_040994.1| External link a0 SF
  a0 PF
gi|116872798|ref|YP_849579.1| External link 2g SF
  2g PF
gi|150395150|ref|YP_001317825.1| External link 1i SF
  1i PF
gi|25012154|ref|NP_736549.1| External link s5 SF
  s5 PF
gi|148379839|ref|YP_001254380.1| External link 0i SF
  0i PF
gi|24379062|ref|NP_721017.1| External link s6 SF
  s6 PF
gi|30264250|ref|NP_846627.1| External link ba SF
  ba PF
gi|15925626|ref|NP_373160.1| External link sa SF
  sa PF
gi|15675446|ref|NP_269620.1| External link x2 SF
  x2 PF
gi|38233762|ref|NP_939529.1| External link cd SF
  cd PF
gi|42783293|ref|NP_980540.1| External link bx SF
  bx PF
gi|19746450|ref|NP_607586.1| External link sx SF
  sx PF
gi|27469136|ref|NP_765773.1| External link s3 SF
  s3 PF
gi|49187077|ref|YP_030329.1| External link b0 SF
  b0 PF
gi|118479366|ref|YP_896517.1| External link 31 SF
  31 PF
gi|15675892|ref|NP_270066.1| External link x2 SF
  x2 PF
gi|18309154|ref|NP_561088.1| External link cu SF
  cu PF
gi|116511683|ref|YP_808899.1| External link 4o SF
  4o PF
gi|157151702|ref|YP_001449999.1| External link 6s SF
  6s PF
gi|189500274|ref|YP_001959744.1| External link 9e SF
  9e PF
gi|51892974|ref|YP_075665.1| External link sb SF
  sb PF
gi|118467361|ref|YP_888065.1| External link 3e SF
  3e PF
gi|148269069|ref|YP_001248012.1| External link 2c SF
  2c PF
gi|170016841|ref|YP_001727760.1| External link 7x SF
  7x PF
gi|50915172|ref|YP_061144.1| External link sp SF
  sp PF
gi|110803977|ref|YP_697498.1| External link 5n SF
  5n PF
gi|94994780|ref|YP_602878.1| External link tg SF
  tg PF
gi|169833673|ref|YP_001694640.1| External link 8e SF
  8e PF
gi|22536679|ref|NP_687530.1| External link s4 SF
  s4 PF
gi|27467025|ref|NP_763662.1| External link s3 SF
  s3 PF
gi|15924510|ref|NP_372044.1| External link sa SF
  sa PF
gi|139473432|ref|YP_001128148.1| External link 4z SF
  4z PF
gi|169831192|ref|YP_001717174.1| External link 7u SF
  7u PF
gi|15643139|ref|NP_228182.1| External link tm SF
  tm PF
gi|146319779|ref|YP_001199491.1| External link 4r SF
  4r PF
gi|110798913|ref|YP_696499.1| External link 2f SF
  2f PF
gi|81428296|ref|YP_395296.1| External link ls SF
  ls PF
gi|15615340|ref|NP_243643.1| External link bh SF
  bh PF
gi|118444192|ref|YP_878059.1| External link 12 SF
  12 PF