DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Auran1|62392 External link a6 SF
  a6 PF
jgi|Emihu1|436317|estExtDG_fgenesh_newKGs_kg.C_400112 External link ex SF
  ex PF
jgi|Phchr1|1414|fgenesh1_pg.C_scaffold_2000392 External link fc SF
  fc PF
121062 External link tl SF
  tl PF
162725 External link tl SF
  tl PF
ENSETEP00000005572 External link e3 SF
  e3 PF
ENSEEUP00000011298 External link e4 SF
  e4 PF
jgi|Auran1|66020 External link a6 SF
  a6 PF
jgi|Auran1|66461 External link a6 SF
  a6 PF
jgi|Phatr2|44750|estExt_fgenesh1_pg.C_chr_50050 External link hr SF
  hr PF No hits
ENSPTRP00000048407 External link xp SF
  xp PF No hits
CNAG_04036.1 n2 SF
  n2 PF
75979 External link ra SF
  ra PF
149766 External link tl SF
  tl PF
jgi|Helro1|62329 External link hx SF
  hx PF
ENSETEP00000011516 External link ee SF
  ee PF No hits
136857 External link tl SF
  tl PF
GSPATP00028128001 External link ir SF
  ir PF
jgi|Emihu1|464192|estExtDG_fgeneshEH_pg.C_410025 External link ex SF
  ex PF
ENSPPYP00000022295 External link o5 SF
  o5 PF No hits
Gm0034x00116 yg SF
  yg PF
ENSMICP00000011909 External link io SF
  io PF No hits
jgi|Poptr1_1|576393|eugene3.00160528 External link pt SF
  pt PF
gnl|CMER|CMR316C External link ya SF
  ya PF No hits
161072 External link tl SF
  tl PF No hits
(NCU08480.2) External link ns SF
  ns PF
30073.m002276 External link rk SF
  rk PF
141192 External link tl SF
  tl PF No hits
ENSP00000342302 External link hs SF
Gene name: HSFY1  hs PF No hits
151121 External link tl SF
  tl PF
ENSPTRP00000038786 External link xp SF
  xp PF No hits
117437 External link tl SF
  tl PF
ENSSARP00000007470 External link xb SF
  xb PF
146547 External link tl SF
  tl PF No hits
ENSPTRP00000038785 External link xq SF
  xq PF No hits
108387 External link tl SF
  tl PF No hits
GSPATP00010352001 External link ir SF
  ir PF
108393 External link tl SF
  tl PF No hits
123146 External link tl SF
  tl PF No hits
99812 External link tl SF
  tl PF No hits
ENSPTRP00000048408 External link xp SF
  xp PF No hits
jgi|Lacbi1|311992|eu2.Lbscf0004g09480 External link lo SF
  lo PF
ENSSARP00000007470 External link xr SF
  xr PF
161041 External link tl SF
  tl PF
150103 External link tl SF
  tl PF
111588 External link tl SF
  tl PF No hits
A7TK66|A7TK66_VANPO External link vw SF
  vw PF
ENSP00000372307 External link hs SF
  hs PF No hits
GSPATP00028126001 External link ir SF
  ir PF
146645 External link tl SF
  tl PF