DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|114566136|ref|YP_753290.1| External link 2l SF
  2l PF
gi|118443661|ref|YP_878062.1| External link 12 SF
  12 PF
gi|167040184|ref|YP_001663169.1| External link 8d SF
  8d PF
gi|152976576|ref|YP_001376093.1| External link 0w SF
  0w PF
gi|125973330|ref|YP_001037240.1| External link 4x SF
  4x PF
gi|47778288|ref|YP_021039.2| External link b2 SF
  b2 PF
gi|49481644|ref|YP_038233.1| External link ko SF
  ko PF
gi|146296905|ref|YP_001180676.1| External link 1q SF
  1q PF
gi|169828963|ref|YP_001699121.1| External link 7z SF
  7z PF
gi|28211235|ref|NP_782179.1| External link te SF
  te PF
gi|153937974|ref|YP_001391194.1| External link 5c SF
  5c PF
gi|15615336|ref|NP_243639.1| External link bh SF
  bh PF
gi|167628435|ref|YP_001678934.1| External link 8j SF
  8j PF
gi|52141324|ref|YP_085505.1| External link x5 SF
  x5 PF
gi|150390276|ref|YP_001320325.1| External link 0n SF
  0n PF
gi|163941929|ref|YP_001646813.1| External link 62 SF
  62 PF
gi|158320634|ref|YP_001513141.1| External link 68 SF
  68 PF
gi|154686686|ref|YP_001421847.1| External link 2o SF
  2o PF
gi|83590348|ref|YP_430357.1| External link m8 SF
  m8 PF
gi|89895087|ref|YP_518574.1| External link d2 SF
  d2 PF
gi|134298950|ref|YP_001112446.1| External link 0c SF
  0c PF
gi|23099327|ref|NP_692793.1| External link oi SF
  oi PF
gi|148379833|ref|YP_001254374.1| External link 0i SF
  0i PF
gi|160880629|ref|YP_001559597.1| External link 5z SF
  5z PF
gi|30022254|ref|NP_833885.1| External link bc SF
  bc PF
gi|170755469|ref|YP_001781423.1| External link 8f SF
  8f PF
gi|150016586|ref|YP_001308840.1| External link 03 SF
  03 PF
gi|78043545|ref|YP_360797.1| External link c9 SF
  c9 PF
gi|52786331|ref|YP_092160.1| External link lc SF
  lc PF
gi|125975566|ref|YP_001039476.1| External link 4x SF
  4x PF
gi|118479363|ref|YP_896514.1| External link 31 SF
  31 PF
gi|49187074|ref|YP_030326.1| External link b0 SF
  b0 PF
gi|153937632|ref|YP_001387671.1| External link 2u SF
  2u PF
gi|42783289|ref|NP_980536.1| External link bx SF
  bx PF
gi|51892970|ref|YP_075661.1| External link sb SF
  sb PF
gi|167037522|ref|YP_001665100.1| External link 82 SF
  82 PF
gi|169831767|ref|YP_001717749.1| External link 7u SF
  7u PF
gi|89894612|ref|YP_518099.1| External link d2 SF
  d2 PF
gi|20807753|ref|NP_622924.1| External link tt SF
  tt PF
gi|138895958|ref|YP_001126411.1| External link 1u SF
  1u PF
gi|187934141|ref|YP_001886584.1| External link 97 SF
  97 PF
gi|16079478|ref|NP_390302.1| External link bs SF
Gene name: spo0A  bs PF
gi|157692921|ref|YP_001487383.1| External link 6f SF
  6f PF
gi|56420922|ref|YP_148240.1| External link gk SF
  gk PF
gi|110801622|ref|YP_699096.1| External link 5n SF
  5n PF
gi|170760118|ref|YP_001787200.1| External link 8s SF
  8s PF
gi|126698810|ref|YP_001087707.1| External link 3x SF
  3x PF
gi|147677538|ref|YP_001211753.1| External link 09 SF
  09 PF
gi|56964222|ref|YP_175953.1| External link x4 SF
  x4 PF
gi|153933947|ref|YP_001384131.1| External link 3t SF
  3t PF