DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|56480001|ref|NP_707803.2| External link s0 SF
  s0 PF
gi|15890187|ref|NP_355859.1| External link au SF
  au PF
gi|33595924|ref|NP_883567.1| External link bp SF
  bp PF
gi|37527102|ref|NP_930446.1| External link pd SF
  pd PF
gi|33601306|ref|NP_888866.1| External link bo SF
  bo PF
gi|37524937|ref|NP_928281.1| External link pd SF
  pd PF No hits
gi|170739532|ref|YP_001768187.1| External link 7s SF
  7s PF
gi|134101280|ref|YP_001106941.1| External link 18 SF
  18 PF
gi|77163811|ref|YP_342336.1| External link nr SF
  nr PF
gi|83644473|ref|YP_432908.1| External link hc SF
  hc PF
gi|21242885|ref|NP_642467.1| External link xc SF
  xc PF
gi|187478155|ref|YP_786179.1| External link 9k SF
  9k PF
gi|145588866|ref|YP_001155463.1| External link 0s SF
  0s PF
gi|25028898|ref|NP_738952.1| External link co SF
  co PF
gi|39937308|ref|NP_949584.1| External link rd SF
  rd PF
gi|94310638|ref|YP_583848.1| External link r4 SF
  r4 PF
gi|54024806|ref|YP_119048.1| External link nf SF
  nf PF
gi|26990263|ref|NP_745688.1| External link ps SF
  ps PF
gi|121611731|ref|YP_999538.1| External link 4b SF
  4b PF
gi|170736291|ref|YP_001777551.1| External link 7j SF
  7j PF
gi|154245499|ref|YP_001416457.1| External link 2d SF
  2d PF
gi|34497778|ref|NP_901993.1| External link vi SF
  vi PF
gi|78063352|ref|YP_373260.1| External link bk SF
  bk PF
gi|170748990|ref|YP_001755250.1| External link 7w SF
  7w PF
gi|33601513|ref|NP_889073.1| External link bo SF
  bo PF
gi|27377870|ref|NP_769399.1| External link bj SF
  bj PF
gi|84623916|ref|YP_451288.1| External link xz SF
  xz PF
gi|163857333|ref|YP_001631631.1| External link 5y SF
  5y PF
gi|192361195|ref|YP_001981681.1| External link 9m SF
  9m PF
gi|78047660|ref|YP_363835.1| External link xv SF
  xv PF
gi|33596115|ref|NP_883758.1| External link bp SF
  bp PF
gi|121606633|ref|YP_983962.1| External link 01 SF
  01 PF
gi|158423905|ref|YP_001525197.1| External link 75 SF
  75 PF
gi|91975822|ref|YP_568481.1| External link rr SF
  rr PF
gi|126435939|ref|YP_001071630.1| External link 22 SF
  22 PF
gi|116691709|ref|YP_837242.1| External link 5l SF
  5l PF
gi|108800316|ref|YP_640513.1| External link yb SF
  yb PF
gi|91789940|ref|YP_550892.1| External link p6 SF
  p6 PF
gi|75675221|ref|YP_317642.1| External link wi SF
  wi PF
gi|27380412|ref|NP_771941.1| External link bj SF
  bj PF
gi|37524129|ref|NP_927473.1| External link pd SF
  pd PF
gi|120555011|ref|YP_959362.1| External link 1n SF
  1n PF
gi|70729533|ref|YP_259271.1| External link qf SF
  qf PF
gi|89900279|ref|YP_522750.1| External link rx SF
  rx PF
gi|160896652|ref|YP_001562234.1| External link 7d SF
  7d PF
gi|148556091|ref|YP_001263673.1| External link 2i SF
  2i PF
gi|171060949|ref|YP_001793298.1| External link 7i SF
  7i PF
gi|119869444|ref|YP_939396.1| External link 46 SF
  46 PF
gi|58582002|ref|YP_201018.1| External link xo SF
  xo PF
gi|92117445|ref|YP_577174.1| External link nb SF
  nb PF