DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|186682001|ref|YP_001865197.1| External link 9j SF
  9j PF
gi|17232056|ref|NP_488604.1| External link no SF
  no PF
gi|75908705|ref|YP_323001.1| External link va SF
  va PF
gi|37521337|ref|NP_924714.1| External link gv SF
  gv PF
gi|37523132|ref|NP_926509.1| External link gv SF
  gv PF
30228.m001671 External link rk SF
  rk PF
gi|71907671|ref|YP_285258.1| External link dj SF
  dj PF
gi|170760228|ref|YP_001788238.1| External link 8s SF
  8s PF
gi|99081791|ref|YP_613945.1| External link ic SF
  ic PF
gi|121604222|ref|YP_981551.1| External link 01 SF
  01 PF
gi|150018084|ref|YP_001310338.1| External link 03 SF
  03 PF
gi|16330881|ref|NP_441609.1| External link cs SF
  cs PF
gi|78356247|ref|YP_387696.1| External link ds SF
  ds PF
gi|91793271|ref|YP_562922.1| External link hw SF
  hw PF No hits
gi|39937482|ref|NP_949758.1| External link rd SF
  rd PF
gi|170754966|ref|YP_001780295.1| External link 8f SF
  8f PF
gi|170759838|ref|YP_001786009.1| External link 8s SF
  8s PF
gi|68537067|ref|YP_251772.1| External link jk SF
  jk PF
gi|170721313|ref|YP_001749001.1| External link 8v SF
  8v PF
gi|150025010|ref|YP_001295836.1| External link 5d SF
  5d PF
gi|89893121|ref|YP_516608.1| External link d2 SF
  d2 PF
gi|121997206|ref|YP_001001993.1| External link 3b SF
  3b PF No hits
gi|163850225|ref|YP_001638268.1| External link 6r SF
  6r PF
gi|15843293|ref|NP_338330.1| External link mu SF
  mu PF No hits
gi|124381869|ref|YP_001023963.1| External link 38 SF
  38 PF
gi|56695310|ref|YP_165658.1| External link sg SF
  sg PF
gi|15605964|ref|NP_213341.1| External link aa SF
  aa PF
gi|26989951|ref|NP_745376.1| External link ps SF
  ps PF
gi|108801781|ref|YP_641978.1| External link yb SF
  yb PF
gi|121639589|ref|YP_979813.1| External link 07 SF
  07 PF
gi|156743822|ref|YP_001433951.1| External link 77 SF
  77 PF
gi|118619417|ref|YP_907749.1| External link 5o SF
  5o PF
gi|148547679|ref|YP_001267781.1| External link 0a SF
  0a PF
gi|186682804|ref|YP_001866000.1| External link 9j SF
  9j PF
gi|134293470|ref|YP_001117206.1| External link 30 SF
  30 PF
gi|33865553|ref|NP_897112.1| External link sy SF
  sy PF
gi|71278119|ref|YP_268058.1| External link lw SF
  lw PF
gi|83717187|ref|YP_439881.1| External link b5 SF
  b5 PF
gi|118474814|ref|YP_891973.1| External link 35 SF
  35 PF
gi|120554969|ref|YP_959320.1| External link 1n SF
  1n PF
gi|15595472|ref|NP_248966.1| External link pa SF
  pa PF
gi|86750261|ref|YP_486757.1| External link rj SF
  rj PF
gi|157376817|ref|YP_001475417.1| External link 6d SF
  6d PF
gi|161520856|ref|YP_001584283.1| External link 76 SF
  76 PF
gi|24374094|ref|NP_718137.1| External link sl SF
  sl PF
gi|114320274|ref|YP_741957.1| External link 5r SF
  5r PF
gi|110634593|ref|YP_674801.1| External link 0p SF
  0p PF
gi|159045061|ref|YP_001533855.1| External link 6q SF
  6q PF
gi|60679953|ref|YP_210097.1| External link fl SF
  fl PF
gi|71909261|ref|YP_286848.1| External link dj SF
  dj PF