DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|88196435|ref|YP_501259.1| External link aq SF
  aq PF
gi|15928078|ref|NP_375611.1| External link s2 SF
  s2 PF
gi|87160985|ref|YP_495072.1| External link a2 SF
  a2 PF
gi|151222606|ref|YP_001333428.1| External link 5p SF
  5p PF
gi|21284147|ref|NP_647235.1| External link s1 SF
  s1 PF
gi|57651006|ref|YP_187302.1| External link x8 SF
  x8 PF
gi|15925489|ref|NP_373023.1| External link sa SF
  sa PF
gi|156980814|ref|YP_001443073.1| External link 71 SF
  71 PF
gi|150395010|ref|YP_001317685.1| External link 1i SF
  1i PF
gi|27468788|ref|NP_765425.1| External link s3 SF
  s3 PF No hits
gi|148268933|ref|YP_001247876.1| External link 2c SF
  2c PF
gi|161510694|ref|YP_001576353.1| External link 6o SF
  6o PF
gi|57867812|ref|YP_189439.1| External link ep SF
  ep PF No hits
gi|49487277|ref|YP_044498.1| External link ar SF
  ar PF
gi|150393124|ref|YP_001315799.1| External link 1i SF
  1i PF No hits
gi|15926294|ref|NP_373827.1| External link s2 SF
  s2 PF No hits
gi|70727280|ref|YP_254196.1| External link zh SF
  zh PF No hits
gi|57867745|ref|YP_189409.1| External link ep SF
  ep PF
gi|81427827|ref|YP_394826.1| External link ls SF
  ls PF
gi|57650082|ref|YP_185556.1| External link x8 SF
  x8 PF No hits
gi|73663412|ref|YP_302193.1| External link zt SF
  zt PF No hits
gi|49482846|ref|YP_040070.1| External link a0 SF
  a0 PF No hits
gi|21282309|ref|NP_645397.1| External link s1 SF
  s1 PF No hits
gi|73663462|ref|YP_302243.1| External link zt SF
  zt PF No hits
gi|86355875|ref|YP_467767.1| External link rz SF
  rz PF
gi|116249990|ref|YP_765828.1| External link 17 SF
  17 PF
gi|27468758|ref|NP_765395.1| External link s3 SF
  s3 PF No hits
gi|27468755|ref|NP_765392.1| External link s3 SF
  s3 PF
gi|153008067|ref|YP_001369282.1| External link 40 SF
  40 PF
gi|148267128|ref|YP_001246071.1| External link 2c SF
  2c PF No hits
gi|91773123|ref|YP_565815.1| External link m9 SF
  m9 PF
gi|73669775|ref|YP_305790.1| External link fu SF
  fu PF No hits
gi|27468353|ref|NP_764990.1| External link s3 SF
  s3 PF No hits
gi|73668613|ref|YP_304628.1| External link fu SF
  fu PF
gi|169627313|ref|YP_001700962.1| External link 8c SF
  8c PF
gi|15963903|ref|NP_384256.1| External link sm SF
  sm PF
gi|27467308|ref|NP_763945.1| External link s3 SF
  s3 PF No hits
gi|28377666|ref|NP_784558.1| External link lb SF
  lb PF
gi|49485490|ref|YP_042711.1| External link ar SF
  ar PF No hits
gi|150393176|ref|YP_001315851.1| External link 1i SF
  1i PF No hits
gi|50121834|ref|YP_051001.1| External link er SF
  er PF No hits
gi|148267076|ref|YP_001246019.1| External link 2c SF
  2c PF No hits
Afum_A1163:AFUB_032120.t1 External link fm SF
  fm PF
gi|73670360|ref|YP_306375.1| External link fu SF
  fu PF No hits
CISG_09050 i5 SF
  i5 PF No hits
gi|28378032|ref|NP_784924.1| External link lb SF
  lb PF
gi|87162371|ref|YP_493308.1| External link a2 SF
  a2 PF No hits
gi|15923606|ref|NP_371140.1| External link sa SF
  sa PF No hits
Afu2g16450 External link ao SF
  ao PF
gi|27468786|ref|NP_765423.1| External link s3 SF
  s3 PF