DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Flagellar transcriptional activator FlhD.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|120598001|ref|YP_962575.1| External link 4g SF
  4g PF No hits
gi|76809263|ref|YP_331499.1| External link bz SF
  bz PF
gi|74317258|ref|YP_314998.1| External link nt SF
  nt PF
gi|16765267|ref|NP_460882.1| External link su SF
Gene name: flhD  su PF
gi|115360931|ref|YP_778068.1| External link 0u SF
  0u PF No hits
gi|73539426|ref|YP_299793.1| External link rl SF
  rl PF
gi|188533600|ref|YP_001907397.1| External link ej SF
  ej PF
gi|145698279|ref|NP_416406.4| External link ec SF
  ec PF
gi|108807854|ref|YP_651770.1| External link ys SF
  ys PF
gi|33592169|ref|NP_879813.1| External link be SF
  be PF
gi|126454127|ref|YP_001068161.1| External link 20 SF
  20 PF
gi|15802304|ref|NP_288329.1| External link e1 SF
  e1 PF
gi|194450869|ref|YP_002045980.1| External link 9r SF
  9r PF
gi|62180502|ref|YP_216919.1| External link x6 SF
  x6 PF
gi|134094519|ref|YP_001099594.1| External link 5e SF
  5e PF
gi|16760874|ref|NP_456491.1| External link ty SF
  ty PF
gi|116695480|ref|YP_841056.1| External link 2j SF
  2j PF No hits
gi|170023986|ref|YP_001720491.1| External link 8r SF
  8r PF
gi|170682029|ref|YP_001743350.1| External link 8k SF
  8k PF
gi|78060497|ref|YP_367072.1| External link bk SF
  bk PF No hits
gi|30250332|ref|NP_842402.1| External link ne SF
  ne PF
gi|82702434|ref|YP_412000.1| External link nl SF
  nl PF
gi|76811191|ref|YP_334631.1| External link bz SF
  bz PF No hits
gi|83719388|ref|YP_441911.1| External link b5 SF
  b5 PF No hits
gi|121595205|ref|YP_987101.1| External link 43 SF
  43 PF No hits
gi|53720921|ref|YP_109907.1| External link pe SF
  pe PF
gi|89108732|ref|AP_002512.1| External link ew SF
  ew PF
gi|157371229|ref|YP_001479218.1| External link 7e SF
  7e PF
gi|160897679|ref|YP_001563261.1| External link 7d SF
  7d PF No hits
gi|172065199|ref|YP_001815911.1| External link 85 SF
  85 PF No hits
gi|170019763|ref|YP_001724717.1| External link 9d SF
  9d PF
gi|85060046|ref|YP_455748.1| External link og SF
  og PF
gi|115350220|ref|YP_772059.1| External link 0u SF
  0u PF
gi|51596731|ref|YP_070922.1| External link yr SF
  yr PF
gi|126452525|ref|YP_001067483.1| External link 20 SF
  20 PF No hits
gi|73538041|ref|YP_298408.1| External link rl SF
  rl PF No hits
gi|161502953|ref|YP_001570065.1| External link 70 SF
  70 PF
gi|152982836|ref|YP_001353792.1| External link 4d SF
  4d PF
gi|134291889|ref|YP_001115658.1| External link 30 SF
  30 PF No hits
27938.m000142 External link rk SF
  rk PF
gi|156933517|ref|YP_001437433.1| External link 69 SF
  69 PF
gi|37525776|ref|NP_929120.1| External link pd SF
  pd PF
gi|186477725|ref|YP_001859195.1| External link 90 SF
  90 PF
gi|89902460|ref|YP_524931.1| External link rx SF
  rx PF No hits
gi|170682029|ref|YP_001743350.1| External link 9t SF
  9t PF
gi|82543634|ref|YP_407581.1| External link sq SF
  sq PF
gi|186895794|ref|YP_001872906.1| External link 9g SF
  9g PF
30554.m000024 External link rk SF
  rk PF
gi|29141434|ref|NP_804776.1| External link es SF
  es PF
gi|107024399|ref|YP_622726.1| External link b6 SF
  b6 PF