DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Emihu1|469133|estExtDG_fgeneshEH_pg.C_2510018 External link ex SF
  ex PF
jgi|Emihu1|99042|fgeneshEH_pg.17__59 External link ex SF
  ex PF
127935 External link sj SF
  sj PF
78457 External link ra SF
  ra PF
jgi|MicpuC2|58710 External link iq SF
  iq PF
jgi|Emihu1|466286|estExtDG_fgeneshEH_pg.C_970054 External link ex SF
  ex PF
jgi|ChlNC64A_1|139722|IGS.gm_26_00075 External link h2 SF
  h2 PF
jgi|Emihu1|211503|gm1.4800108 External link ex SF
  ex PF
jgi|Emihu1|217386|gm1.7300186 External link ex SF
  ex PF
AC208908.1_FGT016 External link ze SF
  ze PF
AC194482.3_FGT032 External link ze SF
  ze PF
jgi|Selmo1|443461|estExt_fgenesh2_pg.C_330199 External link gj SF
  gj PF
jgi|Emihu1|448797|estExtDG_Genemark1.C_100513 External link ex SF
  ex PF
jgi|Emihu1|214413|gm1.6100072 External link ex SF
  ex PF
jgi|Emihu1|97368|fgeneshEH_pg.9__225 External link ex SF
  ex PF
jgi|Emihu1|220174|gm1.9000010 External link ex SF
  ex PF
jgi|Emihu1|227596|gm1.14000088 External link ex SF
  ex PF No hits
jgi|Emihu1|101864|fgeneshEH_pg.35__96 External link ex SF
  ex PF No hits
jgi|Emihu1|223301|gm1.10900009 External link ex SF
  ex PF
jgi|Emihu1|106636|fgeneshEH_pg.80__44 External link ex SF
  ex PF No hits
jgi|Emihu1|244291|gm1.41500032 External link ex SF
  ex PF
GSVIVP00019092001 vt SF
  vt PF
jgi|Emihu1|114792|fgeneshEH_pg.230__30 External link ex SF
  ex PF
jgi|Emihu1|109235|fgeneshEH_pg.115__78 External link ex SF
  ex PF No hits
jgi|Emihu1|98020|fgeneshEH_pg.12__140 External link ex SF
  ex PF
jgi|Emihu1|103815|fgeneshEH_pg.53__65 External link ex SF
  ex PF
jgi|Emihu1|114210|fgeneshEH_pg.210__23 External link ex SF
  ex PF
AC193501.3_FGT023 External link ze SF
  ze PF
AC200038.3_FGT020 External link ze SF
  ze PF
jgi|Emihu1|111806|fgeneshEH_pg.157__59 External link ex SF
  ex PF
jgi|Emihu1|113786|fgeneshEH_pg.199__25 External link ex SF
  ex PF
jgi|Emihu1|195991|gm1.400113 External link ex SF
  ex PF
jgi|Emihu1|95690|fgeneshEH_pg.3__365 External link ex SF
  ex PF
jgi|Emihu1|463815|estExtDG_fgeneshEH_pg.C_340065 External link ex SF
  ex PF
jgi|Emihu1|110687|fgeneshEH_pg.138__35 External link ex SF
  ex PF
AC193501.3_FGT018 External link ze SF
  ze PF
jgi|Emihu1|120876|fgeneshEH_pg.730__3 External link ex SF
  ex PF
jgi|Emihu1|116069|fgeneshEH_pg.277__32 External link ex SF
  ex PF
jgi|Emihu1|107515|fgeneshEH_pg.92__29 External link ex SF
  ex PF
jgi|Emihu1|95831|fgeneshEH_pg.4__61 External link ex SF
  ex PF
jgi|Emihu1|103206|fgeneshEH_pg.47__73 External link ex SF
  ex PF No hits
jgi|Emihu1|236206|gm1.23100065 External link ex SF
  ex PF
jgi|Emihu1|233730|gm1.19600064 External link ex SF
  ex PF
jgi|Emihu1|124766|fgeneshEH_pg.6514__1 External link ex SF
  ex PF
AC193501.3_FGT011 External link ze SF
  ze PF
jgi|Emihu1|101766|fgeneshEH_pg.34__148 External link ex SF
  ex PF
jgi|Emihu1|451545|estExtDG_Genemark1.C_450222 External link ex SF
  ex PF
jgi|ChlNC64A_1|143607|IGS.gm_6_00181 External link h2 SF
  h2 PF
jgi|ChlNC64A_1|57326|estExt_fgenesh3_pg.C_50293 External link h2 SF
  h2 PF
jgi|Volca1|102996|estExt_fgenesh4_pg.C_30147 External link vo SF
  vo PF