DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
F32H2.1a External link ce SF
Gene name: CE09876  ce PF
F32H2.1b External link ce SF
Gene name: CE17749  ce PF
F32H2.1a External link cz SF
Gene name: CE09876  cz PF
F32H2.1a External link cl SF
Gene name: CE09876  cl PF
ENSLAFP00000014748 External link lk SF
  lk PF
Cryptosporidium_parvum_Iowa_II|AAEE01000004|cgd3_1120|Annotation|GenBank| External link cv SF
  cv PF No hits
F32H2.1b External link cl SF
Gene name: CE17749  cl PF
F32H2.1a External link cn SF
Gene name: CE09876  cn PF
ENSLAFP00000014748 External link l1 SF
  l1 PF
ENSGACP00000014242 External link g1 SF
  g1 PF
ENSOCUP00000005005 External link o3 SF
  o3 PF
ENSOCUP00000005005 External link ok SF
  ok PF
AP006148_5.1 External link jp SF
  jp PF
ENSOCUP00000013054 External link o3 SF
  o3 PF
GSPATP00022550001 External link ir SF
  ir PF
ENSOCUP00000013054 External link ok SF
  ok PF
AT4G00540.2 External link at SF
  at PF
ENSGACP00000014242 External link gc SF
  gc PF
evm.TU.supercontig_214.5 r6 SF
  r6 PF
GSVIVP00032264001 vt SF
  vt PF
Gm0131x00183 yg SF
  yg PF
evm.TU.supercontig_14.220 r6 SF
  r6 PF
AT5G12870.1 External link ad SF
  ad PF
jgi|MicpuC2|6863 External link iq SF
  iq PF
LOC_Os04g43680.1|12004.m09327|protein External link os SF
  os PF
93040.m00049 External link tx SF
  tx PF
jgi|Poptr1_1|582403|eugene3.13810002 External link pt SF
  pt PF
ENSFCAP00000008877 External link f1 SF
  f1 PF
86412.m00139 External link tx SF
  tx PF
Gm0002x00370 yg SF
  yg PF
AT1G66380.1 External link ad SF
  ad PF
AT5G14750.1 External link at SF
  at PF
53158 External link ra SF
  ra PF
AC186888.2_FGT022 External link ze SF
  ze PF
jgi|Poptr1_1|420643|gw1.VIII.2071.1 External link pt SF
  pt PF
AT5G12870.1 External link at SF
  at PF
GSVIVP00016469001 vt SF
  vt PF
97417.m00107 External link tx SF
  tx PF
GSPATP00033251001 External link ir SF
  ir PF
Gm0021x00535 yg SF
  yg PF
Gm0030x00066 yg SF
  yg PF
AT1G66390.1 External link ad SF
  ad PF
AT1G66380.1 External link at SF
  at PF
evm.TU.supercontig_51.67 r6 SF
  r6 PF
94179.m00254 External link tx SF
  tx PF
evm.TU.supercontig_126.33 r6 SF
  r6 PF
jgi|Sorbi1|5058397|Sb07g003320 External link oj SF
  oj PF
29813.m001506 External link rk SF
  rk PF
jgi|Phypa1_1|153179|e_gw1.389.9.1 External link pw SF
  pw PF
93465.m00050 External link tx SF
  tx PF