DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Nucleic acid-binding proteins.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Auran1|64934 External link a6 SF
  a6 PF
jgi|Auran1|60508 External link a6 SF
  a6 PF
gi|72116887|ref|XP_788134.1| External link tu SF
  tu PF
gi|115950839|ref|XP_001185543.1| External link tu SF
  tu PF
jgi|Selmo1|405045|fgenesh2_pg.C_scaffold_3000268 External link gj SF
  gj PF
jgi|Emihu1|95733|fgeneshEH_pg.3__408 External link ex SF
  ex PF
jgi|Emihu1|119956|fgeneshEH_pg.550__5 External link ex SF
  ex PF
jgi|Nemve1|202545|fgenesh1_pg.scaffold_36000022 External link nw SF
  nw PF
ENSBTAP00000040642 External link bv SF
  bv PF
jgi|Poptr1_1|796697|fgenesh4_pg.C_scaffold_57000076 External link pt SF
  pt PF
IMGA|AC121233_18.1 External link mw SF
  mw PF
LOC_Os02g02870.1|12002.m05637|protein External link os SF
  os PF
29405.m000161 External link rk SF
  rk PF
evm.TU.supercontig_6.261 r6 SF
  r6 PF
jgi|Sorbi1|5054570|Sb04g001720 External link oj SF
  oj PF
jgi|Poptr1_1|412941|gw1.III.44.1 External link pt SF
  pt PF
ENSPPYP00000018894 External link o5 SF
  o5 PF
ENSETEP00000012432 External link e3 SF
  e3 PF
jgi|Dappu1|52316|e_gw1.29.67.1 External link d7 SF
  d7 PF
ENSPTRP00000000673 External link xp SF
  xp PF
ENSPTRP00000031518 External link xp SF
  xp PF
ENSDARP00000019558 External link da SF
  da PF
jgi|Phypa1_1|47533|gw1.103.78.1 External link pw SF
  pw PF
ENSCPOP00000005571 External link gu SF
  gu PF
ENSCAFP00000005361 External link di SF
  di PF
ENSP00000376469 External link ht SF
  ht PF
ENSXETP00000026953 External link xn SF
  xn PF
ENSGACP00000012430 External link gc SF
  gc PF
ENSMMUP00000018998 External link r2 SF
  r2 PF
ENSP00000254231 External link hs SF
Gene name: LIN28  hs PF
ENSRNOP00000020641 External link rn SF
  rn PF
ENSMLUP00000009251 External link lu SF
  lu PF
ENSOANP00000016343 External link oh SF
  oh PF
ENSGACP00000018348 External link g1 SF
  g1 PF
F02E9.2a External link ce SF
Gene name: CE24879  ce PF
ENSGACP00000010372 External link gc SF
  gc PF
ENSCSAVP00000011162 External link c0 SF
  c0 PF
F02E9.2a External link cl SF
Gene name: CE24879  cl PF
ENSECAP00000018401 External link e5 SF
  e5 PF
ENSDARP00000015591 External link df SF
  df PF
ENSCAFP00000018394 External link dg SF
  dg PF
ENSPTRP00000000673 External link xq SF
  xq PF
ENSORLP00000018011 External link ol SF
  ol PF
ENSPTRP00000031518 External link xq SF
  xq PF
bma1.CDS.241440.0 r0 SF
  r0 PF
ENSETEP00000012432 External link ee SF
  ee PF
ENSP00000363314 External link hs SF
  hs PF
CG17334-PA External link dn SF
Gene name: CG17334  dn PF
GSVIVP00036773001 vt SF
  vt PF
ENSTRUP00000021112 External link to SF
  to PF