DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
scaffold_695.3 External link nk SF
  nk PF
GSPATP00007451001 External link ir SF
  ir PF
jgi|Emihu1|470076|estExtDG_fgeneshEH_pg.C_3700008 External link ex SF
  ex PF
(SNU09038.1) nd SF
  nd PF
Y53C10A.3 External link cz SF
Gene name: CE22371  cz PF
Y53C10A.3 External link ce SF
Gene name: CE22371  ce PF
jgi|Phatr2|49558|estExt_fgenesh1_pg.C_chr_230015 External link hr SF
  hr PF
PITG_04700 iy SF
  iy PF
jgi|Auran1|61000 External link a6 SF
  a6 PF
jgi|Sporo1|32161|estExt_fgenesh1_pg.C_30124 External link yu SF
  yu PF
jgi|Phatr2|55108|estExt_Phatr1_ua_kg.C_chr_240019 External link hr SF
  hr PF
CTRG_05246.3 t3 SF
  t3 PF
Afu6g12520 External link ao SF
  ao PF
CPAG_01082 i6 SF
  i6 PF
177.m03024 External link cf SF
  cf PF
Kwal_16770 External link kw SF
  kw PF
jgi|Mycfi1|52047|estExt_Genewise1.C_120203 External link ym SF
  ym PF
PGUG_02177.1 ng SF
  ng PF
ORFP:9590 y8 SF
  y8 PF
jgi|Pospl1|126525|estExt_fgenesh3_pg.C_990040 External link ia SF
  ia PF
CIRG_01878 i4 SF
  i4 PF
jgi|Phybl1|71487|fgeneshPB_pg.42__109 External link hn SF
  hn PF
YHR206W External link xs SF
Gene name: SKN7  xs PF
jgi|CocheC5_1|91618|estExt_Genewise1.C_160427 External link wc SF
  wc PF
FVEG_05036 fv SF
  fv PF
44708 re SF
  re PF
jgi|Trive1|37224|e_gw1.6.146.1 External link nj SF
  nj PF
CLUG_03418 iu SF
  iu PF
CIMG_01739 im SF
  im PF
VDBG_03345 ve SF
  ve PF
sgtc|cn07305 n1 SF
  n1 PF
ADL388W External link go SF
  go PF
ORFP:10387 y6 SF
  y6 PF
AFL2G_02624 gq SF
  gq PF
jgi|Phybl1|79068|estExt_fgeneshPB_pg.C_220020 External link hn SF
  hn PF
VDAG_02250 vd SF
  vd PF
CAWG_04419 iw SF
  iw PF
jgi|Mycgr1|2227|gw.4.182.1 External link yo SF
  yo PF
SJAG_01532 hj SF
  hj PF
RO3G_15453.1 ry SF
  ry PF
UREG_05447.1 ur SF
  ur PF
(SNU02697.1) nd SF
  nd PF
YHR206W External link sc SF
Gene name: SKN7  sc PF
RO3G_11609.1 ry SF
  ry PF
MG03516.4 gr SF
  gr PF
NFIA_058480 External link nh SF
  nh PF
gnl|GLV|DEHA0B08063g dh SF
  dh PF
ORFP:11061 y1 SF
  y1 PF
Pa_5_5910 nq SF
  nq PF
gi|19173424|ref|NP_597227.1| External link eu SF
  eu PF