DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: HLH, helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Necha2|75378|fgenesh1_pg.sca_1_chr1_3_0000989 External link nx SF
  nx PF
GSVIVP00010768001 vt SF
  vt PF
ENSTBEP00000012190 External link t2 SF
  t2 PF
ENSDNOP00000007705 External link d5 SF
  d5 PF
ENSDNOP00000007705 External link d6 SF
  d6 PF
ENSMICP00000001429 External link i2 SF
  i2 PF No hits
ENSSARP00000004711 External link xr SF
  xr PF
ENSSTOP00000005382 External link gb SF
  gb PF
ENSSTOP00000005382 External link g3 SF
  g3 PF
ENSTBEP00000012190 External link tz SF
  tz PF
ENSMICP00000001429 External link io SF
  io PF No hits
ENSSARP00000004711 External link xb SF
  xb PF
ENSP00000361073 External link hs SF
  hs PF
ENSEEUP00000010207 External link ek SF
  ek PF
ENSRNOP00000005782 External link rn SF
  rn PF
ENSBTAP00000032882 External link bw SF
  bw PF
ENSXETP00000007533 External link xn SF
  xn PF
ENSCAFP00000015958 External link dg SF
  dg PF
ENSPPYP00000014068 External link o5 SF
  o5 PF
ENSP00000320940 External link ht SF
  ht PF
gi|148235628|ref|NP_001081733| External link xl SF
  xl PF
ENSCPOP00000001011 External link gu SF
  gu PF
gi|148227922|ref|NP_001081732| External link xl SF
  xl PF
ENSP00000361066 External link hs SF
  hs PF
ENSP00000361066 External link ht SF
  ht PF
ENSMUSP00000072285 External link mm SF
  mm PF
ENSCAFP00000015958 External link di SF
  di PF
ENSP00000361065 External link hs SF
  hs PF
ENSECAP00000015513 External link e5 SF
  e5 PF
ENSXETP00000007533 External link xk SF
  xk PF
ENSPPYP00000014068 External link of SF
  of PF
ENSCAFP00000006049 External link di SF
  di PF
ENSGALP00000026767 External link gh SF
  gh PF
ENSGALP00000007263 External link gg SF
  gg PF No hits
ENSSARP00000013042 External link xb SF
  xb PF
ENSMMUP00000027425 External link ru SF
  ru PF
ENSTRUP00000012341 External link tq SF
  tq PF
ENSETEP00000011080 External link ee SF
  ee PF
ENSEEUP00000001554 External link e4 SF
  e4 PF
ENSMMUP00000027423 External link r2 SF
  r2 PF No hits
ENSMMUP00000015773 External link ru SF
  ru PF
ENSPTRP00000023375 External link xq SF
  xq PF
ENSPPYP00000012407 External link of SF
  of PF
ENSGACP00000023212 External link gc SF
  gc PF
ENSCAFP00000006049 External link dg SF
  dg PF
ENSTRUP00000023905 External link to SF
  to PF
ENSECAP00000015513 External link eq SF
  eq PF
ENSDNOP00000014460 External link d5 SF
  d5 PF
ENSGALP00000026767 External link gg SF
  gg PF
ENSRNOP00000040986 External link ro SF
  ro PF