DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|107023280|ref|YP_621607.1| External link b6 SF
  b6 PF No hits
gi|116690363|ref|YP_835986.1| External link 5l SF
  5l PF No hits
gi|167644126|ref|YP_001681789.1| External link 7o SF
  7o PF
gi|88196179|ref|YP_500996.1| External link aq SF
  aq PF
gi|17547149|ref|NP_520551.1| External link rs SF
  rs PF
gi|162147811|ref|YP_001602272.1| External link 7c SF
  7c PF
gi|119719287|ref|YP_919782.1| External link 2v SF
  2v PF No hits
gi|88196210|ref|YP_501027.1| External link aq SF
  aq PF No hits
gi|21283914|ref|NP_647002.1| External link s1 SF
  s1 PF
gi|150394771|ref|YP_001317446.1| External link 1i SF
  1i PF
gi|15596139|ref|NP_249633.1| External link pa SF
  pa PF
gi|157372007|ref|YP_001479996.1| External link 7e SF
  7e PF
gi|60680093|ref|YP_210237.1| External link fl SF
  fl PF
gi|161510489|ref|YP_001576148.1| External link 6o SF
  6o PF No hits
gi|148272853|ref|YP_001222414.1| External link 32 SF
  32 PF No hits
gi|150394799|ref|YP_001317474.1| External link 1i SF
  1i PF No hits
gi|15790962|ref|NP_280786.1| External link hb SF
  hb PF
gi|156980610|ref|YP_001442869.1| External link 71 SF
  71 PF No hits
gi|148268732|ref|YP_001247675.1| External link 2c SF
  2c PF No hits
gi|57652227|ref|YP_187094.1| External link x8 SF
  x8 PF No hits
gi|15925257|ref|NP_372791.1| External link sa SF
  sa PF
gi|87161800|ref|YP_494853.1| External link a2 SF
  a2 PF
gi|49484482|ref|YP_041706.1| External link a0 SF
  a0 PF
gi|73661955|ref|YP_300736.1| External link zt SF
  zt PF No hits
gi|49487048|ref|YP_044269.1| External link ar SF
  ar PF
gi|82751883|ref|YP_417624.1| External link sk SF
  sk PF No hits
gi|21227196|ref|NP_633118.1| External link mz SF
  mz PF
gi|161510461|ref|YP_001576120.1| External link 6o SF
  6o PF
gi|49487076|ref|YP_044297.1| External link ar SF
  ar PF No hits
gi|53711865|ref|YP_097857.1| External link fa SF
  fa PF
gi|57650850|ref|YP_187065.1| External link x8 SF
  x8 PF
132.m00097 External link en SF
  en PF No hits
gi|156980582|ref|YP_001442841.1| External link 71 SF
  71 PF
gi|154151077|ref|YP_001404695.1| External link 3p SF
  3p PF No hits
gi|15927847|ref|NP_375380.1| External link s2 SF
  s2 PF
jgi|Chlre3|110910|e_gwH.1458.4.1 External link cy SF
  cy PF No hits
gi|21283942|ref|NP_647030.1| External link s1 SF
  s1 PF No hits
gi|169830124|ref|YP_001700282.1| External link 7z SF
  7z PF
gi|87159999|ref|YP_494880.1| External link a2 SF
  a2 PF No hits
gi|15927875|ref|NP_375408.1| External link s2 SF
  s2 PF No hits
gi|116048866|ref|YP_792333.1| External link 2t SF
  2t PF
gi|49484510|ref|YP_041734.1| External link a0 SF
  a0 PF No hits
gi|148268705|ref|YP_001247648.1| External link 2c SF
  2c PF
gi|70725767|ref|YP_252681.1| External link zh SF
  zh PF
gi|151222379|ref|YP_001333201.1| External link 5p SF
  5p PF
gi|151222407|ref|YP_001333229.1| External link 5p SF
  5p PF No hits
gi|29347845|ref|NP_811348.1| External link bt SF
  bt PF
gi|15925285|ref|NP_372819.1| External link sa SF
  sa PF No hits
gi|169236709|ref|YP_001689909.1| External link 8m SF
  8m PF
gi|20093195|ref|NP_619270.1| External link ma SF
  ma PF