DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|121609669|ref|YP_997476.1| External link 4b SF
  4b PF
27582.m000062 External link rk SF
  rk PF
gi|117618129|ref|YP_858062.1| External link 33 SF
  33 PF
gi|146302549|ref|YP_001197140.1| External link 1z SF
  1z PF
27668.m000050 External link rk SF
  rk PF
gi|19704794|ref|NP_604356.1| External link fn SF
  fn PF
32230.m000024 External link rk SF
  rk PF
30224.m006372 External link rk SF
  rk PF
gi|15840208|ref|NP_335245.1| External link mu SF
  mu PF
ACYPI21186-PA External link qp SF
  qp PF
gi|153955416|ref|YP_001396181.1| External link 16 SF
  16 PF
gi|29377124|ref|NP_816278.1| External link ef SF
  ef PF
gi|18311287|ref|NP_563221.1| External link cu SF
  cu PF
gi|110800256|ref|YP_696979.1| External link 2f SF
  2f PF
30219.m001481 External link rk SF
  rk PF
gi|108804687|ref|YP_644624.1| External link rw SF
  rw PF
gi|118467846|ref|YP_887705.1| External link 3e SF
  3e PF
gi|90021413|ref|YP_527240.1| External link d0 SF
  d0 PF
gi|182436681|ref|YP_001824400.1| External link 7n SF
  7n PF
gi|110632927|ref|YP_673135.1| External link 0p SF
  0p PF
gi|29375815|ref|NP_814969.1| External link ef SF
  ef PF
gi|108802937|ref|YP_642874.1| External link rw SF
  rw PF
gi|52081577|ref|YP_080368.1| External link lf SF
  lf PF
gi|28895478|ref|NP_801828.1| External link s8 SF
  s8 PF
gi|50914679|ref|YP_060651.1| External link sp SF
  sp PF
gi|71904018|ref|YP_280821.1| External link zy SF
  zy PF
gi|148269785|ref|YP_001244245.1| External link 0v SF
  0v PF
gi|170288471|ref|YP_001738709.1| External link 92 SF
  92 PF
gi|15894619|ref|NP_347968.1| External link ca SF
  ca PF
gi|116617961|ref|YP_818332.1| External link 2s SF
  2s PF
gi|53711543|ref|YP_097535.1| External link fa SF
  fa PF
gi|56420442|ref|YP_147760.1| External link gk SF
  gk PF
gi|16080450|ref|NP_391277.1| External link bs SF
Gene name: araR  bs PF
gi|139473400|ref|YP_001128116.1| External link 4z SF
  4z PF
gi|150020904|ref|YP_001306258.1| External link 2y SF
  2y PF
gi|15643045|ref|NP_228088.1| External link tm SF
  tm PF
gi|116670260|ref|YP_831193.1| External link 1f SF
  1f PF
gi|138895450|ref|YP_001125903.1| External link 1u SF
  1u PF
gi|116872151|ref|YP_848932.1| External link 2g SF
  2g PF
gi|255533006|ref|YP_003093378.1| External link p5 SF
  p5 PF
gi|157693094|ref|YP_001487556.1| External link 6f SF
  6f PF
gi|28379868|ref|NP_786760.1| External link lb SF
  lb PF
gi|255533762|ref|YP_003094134.1| External link p5 SF
  p5 PF
gi|60679904|ref|YP_210048.1| External link fl SF
  fl PF
gi|94990940|ref|YP_599040.1| External link ts SF
  ts PF
gi|146295761|ref|YP_001179532.1| External link 1q SF
  1q PF
gi|116623440|ref|YP_825596.1| External link 25 SF
  25 PF
gi|16802812|ref|NP_464297.1| External link lm SF
  lm PF
gi|52786957|ref|YP_092786.1| External link lc SF
  lc PF
gi|53711659|ref|YP_097651.1| External link fa SF
  fa PF