DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|73542736|ref|YP_297256.1| External link rl SF
  rl PF
gi|13475657|ref|NP_107224.1| External link mk SF
  mk PF
gi|152977196|ref|YP_001376713.1| External link 0w SF
  0w PF
gi|120613125|ref|YP_972803.1| External link 4t SF
  4t PF
gi|167630562|ref|YP_001681061.1| External link 8j SF
  8j PF
gi|169235937|ref|YP_001689137.1| External link 8m SF
  8m PF
gi|37676899|ref|NP_937295.1| External link vb SF
  vb PF
gi|158318592|ref|YP_001511100.1| External link 6p SF
  6p PF
gi|110634759|ref|YP_674967.1| External link 0p SF
  0p PF
gi|54303606|ref|YP_133599.1| External link he SF
  he PF
gi|121606658|ref|YP_983987.1| External link 01 SF
  01 PF
gi|41615022|ref|NP_963520.1| External link na SF
  na PF
gi|86357373|ref|YP_469265.1| External link rz SF
  rz PF
gi|78042949|ref|YP_358986.1| External link c9 SF
  c9 PF
gi|189218679|ref|YP_001939320.1| External link 9h SF
  9h PF
gi|16080193|ref|NP_391019.1| External link bs SF
Gene name: yugG  bs PF
gi|157693561|ref|YP_001488023.1| External link 6f SF
  6f PF
gi|156976156|ref|YP_001447062.1| External link 65 SF
  65 PF
gi|91786310|ref|YP_547262.1| External link p6 SF
  p6 PF
gi|16554484|ref|NP_444208.1| External link hb SF
  hb PF
gi|86748638|ref|YP_485134.1| External link rj SF
  rj PF
gi|89902651|ref|YP_525122.1| External link rx SF
  rx PF
gi|27367184|ref|NP_762711.1| External link vv SF
  vv PF
gi|148555613|ref|YP_001263195.1| External link 2i SF
  2i PF
gi|110636288|ref|YP_676496.1| External link 0p SF
  0p PF
gi|89902641|ref|YP_525112.1| External link rx SF
  rx PF
gi|170683507|ref|YP_001744354.1| External link 8k SF
  8k PF
gi|24113547|ref|NP_708057.1| External link s0 SF
  s0 PF
gi|16804379|ref|NP_465864.1| External link lm SF
  lm PF
gi|89108977|ref|AP_002757.1| External link ew SF
  ew PF
gi|82544622|ref|YP_408569.1| External link sq SF
  sq PF
gi|82777339|ref|YP_403688.1| External link d1 SF
  d1 PF
gi|94984466|ref|YP_603830.1| External link d4 SF
  d4 PF
gi|170756384|ref|YP_001780791.1| External link 8f SF
  8f PF
gi|148266734|ref|YP_001245677.1| External link 2c SF
  2c PF
gi|150392775|ref|YP_001315450.1| External link 1i SF
  1i PF
gi|15802716|ref|NP_288743.1| External link e1 SF
  e1 PF
gi|157161642|ref|YP_001458960.1| External link 72 SF
  72 PF
gi|153934943|ref|YP_001387078.1| External link 2u SF
  2u PF
gi|170081782|ref|YP_001731102.1| External link 8n SF
  8n PF
gi|153932194|ref|YP_001383529.1| External link 3t SF
  3t PF
gi|187730451|ref|YP_001879509.1| External link ez SF
  ez PF
gi|167038926|ref|YP_001661911.1| External link 8d SF
  8d PF
gi|78045094|ref|YP_358948.1| External link c9 SF
  c9 PF
gi|20806843|ref|NP_622014.1| External link tt SF
  tt PF
gi|30063601|ref|NP_837772.1| External link fs SF
  fs PF
gi|82750011|ref|YP_415752.1| External link sk SF
  sk PF
gi|49482543|ref|YP_039767.1| External link a0 SF
  a0 PF
gi|170758810|ref|YP_001786551.1| External link 8s SF
  8s PF
gi|16130098|ref|NP_416665.1| External link ec SF
Gene name: yeiI  ec PF