DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
Gm0076x00032 yg SF
  yg PF
GSVIVP00029928001 vt SF
  vt PF
jgi|MicpuC2|29430 External link iq SF
  iq PF
AC187048.4_FGT012 External link ze SF
  ze PF
jgi|Selmo1|55595|gw1.39.414.1 External link gj SF
  gj PF
30147.m014309 External link rk SF
  rk PF
Gm0120x00074 yg SF
  yg PF
AP006131_36.1 External link jp SF
  jp PF
LOC_Os05g32880.1|12005.m07520|protein External link os SF
  os PF
Gm0025x00228 yg SF
  yg PF
AT1G49190.1 External link ad SF
  ad PF
LOC_Os03g12350.1|12003.m06685|protein External link os SF
  os PF
evm.TU.contig_25091.4 r6 SF
  r6 PF
AT3G16857.2 External link ad SF
  ad PF
jgi|Selmo1|65512|gw1.9.920.1 External link gj SF
  gj PF
29929.m004754 External link rk SF
  rk PF
jgi|ChlNC64A_1|30989|estExt_Genewise1.C_90203 External link h2 SF
  h2 PF
evm.TU.supercontig_86.17 r6 SF
  r6 PF
jgi|Ostta4|24566|estExt_fgenesh1_pg.C_Chr_16.00010090 External link ou SF
  ou PF
AT4G31920.1 External link at SF
  at PF
AT2G01760.1 External link at SF
  at PF
jgi|Poptr1_1|575747|eugene3.00151142 External link pt SF
  pt PF
GSVIVP00032706001 vt SF
  vt PF
jgi|Sorbi1|5061408|Sb10g005580 External link oj SF
  oj PF
AP004911_17.1 External link jp SF
  jp PF
GSVIVP00007403001 vt SF
  vt PF
AT5G07210.1 External link at SF
  at PF
Gm0044x00046 yg SF
  yg PF
LOC_Os01g67770.1|12001.m12881|protein External link os SF
  os PF
Gm0068x00313 yg SF
  yg PF
GSVIVP00033093001 vt SF
  vt PF
AT2G27070.1 External link at SF
  at PF
GSVIVP00030597001 vt SF
  vt PF
jgi|Poptr1_1|231691|gw1.X.6388.1 External link pt SF
  pt PF
evm.TU.supercontig_46.117 r6 SF
  r6 PF
jgi|Selmo1|428906|fgenesh2_pg.C_scaffold_108000072 External link gj SF
  gj PF
LOC_Os06g43910.1|12006.m08921|protein External link os SF
  os PF
jgi|Phypa1_1|152341|e_gw1.362.4.1 External link pw SF
  pw PF
AT2G01760.1 External link ad SF
  ad PF
evm.TU.supercontig_1680.1 r6 SF
  r6 PF
jgi|Poptr1_1|419184|gw1.VIII.612.1 External link pt SF
  pt PF
AT4G18020.3 External link at SF
  at PF
jgi|Poptr1_1|572186|eugene3.00140231 External link pt SF
  pt PF
Gm0086x00244 yg SF
  yg PF No hits
jgi|Phypa1_1|123034|e_gw1.42.55.1 External link pw SF
  pw PF
AT3G62670.1 External link ad SF
  ad PF
AC196781.3_FGT034 External link ze SF
  ze PF
AT2G25180.1 External link ad SF
  ad PF
29889.m003245 External link rk SF
  rk PF
GSVIVP00015824001 vt SF
  vt PF