DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
30083.m000436 External link rk SF
  rk PF
30087.m000622 External link rk SF
  rk PF
gi|170736398|ref|YP_001777658.1| External link 7j SF
  7j PF
gi|15829896|ref|NP_308669.1| External link eo SF
  eo PF
gi|17547307|ref|NP_520709.1| External link rs SF
  rs PF
gi|145599797|ref|YP_001163873.1| External link 5h SF
  5h PF
gi|110670668|ref|YP_667225.1| External link 4s SF
  4s PF
jgi|Chlre3|52014|gwH.1227.2.1 External link cy SF
  cy PF No hits
gi|28897466|ref|NP_797071.1| External link vp SF
  vp PF
gi|152988710|ref|YP_001350077.1| External link 4j SF
  4j PF
gi|152994220|ref|YP_001339055.1| External link 0z SF
  0z PF
gi|170757771|ref|YP_001780653.1| External link 8f SF
  8f PF
gi|57865640|ref|YP_189786.1| External link ep SF
  ep PF
gi|77459000|ref|YP_348506.1| External link pn SF
  pn PF
gi|145297628|ref|YP_001140469.1| External link 44 SF
  44 PF
gi|116873666|ref|YP_850447.1| External link 2g SF
  2g PF
gi|66767446|ref|YP_242208.1| External link xa SF
  xa PF
gi|190891099|ref|YP_001977641.1| External link 9p SF
  9p PF
gi|157963768|ref|YP_001503802.1| External link 6t SF
  6t PF
gi|120608930|ref|YP_968608.1| External link 4t SF
  4t PF
gi|167033696|ref|YP_001668927.1| External link 7g SF
  7g PF
gi|170735799|ref|YP_001777059.1| External link 7j SF
  7j PF
gi|114045768|ref|YP_736318.1| External link 24 SF
  24 PF
gi|145300830|ref|YP_001143671.1| External link 44 SF
  44 PF
gi|66767354|ref|YP_242116.1| External link xa SF
  xa PF
gi|126446961|ref|YP_001077635.1| External link 1y SF
  1y PF
gi|157962722|ref|YP_001502756.1| External link 6t SF
  6t PF
gi|116670448|ref|YP_831381.1| External link 1f SF
  1f PF
gi|37676320|ref|NP_936716.1| External link vb SF
  vb PF
gi|15642380|ref|NP_232013.1| External link vc SF
  vc PF
gi|146312400|ref|YP_001177474.1| External link 08 SF
  08 PF
gi|167644963|ref|YP_001682626.1| External link 7o SF
  7o PF
gi|83649627|ref|YP_438062.1| External link hc SF
  hc PF
gi|94310877|ref|YP_584087.1| External link r4 SF
  r4 PF
gi|91786569|ref|YP_547521.1| External link p6 SF
  p6 PF
gi|171056803|ref|YP_001789152.1| External link 7i SF
  7i PF
gi|120405470|ref|YP_955299.1| External link 28 SF
  28 PF
gi|110634719|ref|YP_674927.1| External link 0p SF
  0p PF
gi|115360238|ref|YP_777376.1| External link 0u SF
  0u PF
gi|157376054|ref|YP_001474654.1| External link 6d SF
  6d PF
gi|119871391|ref|YP_941343.1| External link 46 SF
  46 PF
gi|108807021|ref|YP_650937.1| External link ys SF
  ys PF
gi|167034584|ref|YP_001669815.1| External link 7g SF
  7g PF
gi|108809553|ref|YP_653469.1| External link ys SF
  ys PF
gi|194450426|ref|YP_002044792.1| External link 9r SF
  9r PF
gi|27381940|ref|NP_773469.1| External link bj SF
  bj PF
gi|111020802|ref|YP_703774.1| External link 3r SF
  3r PF
gi|170082379|ref|YP_001731699.1| External link 8n SF
  8n PF
gi|88194670|ref|YP_499466.1| External link aq SF
  aq PF
gi|186475930|ref|YP_001857400.1| External link 90 SF
  90 PF