DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Putative DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|162452134|ref|YP_001614501.1| External link 60 SF
  60 PF
gi|82751985|ref|YP_417726.1| External link sk SF
  sk PF
gi|87161508|ref|YP_494971.1| External link a2 SF
  a2 PF
gi|57650933|ref|YP_187191.1| External link x8 SF
  x8 PF
gi|153953187|ref|YP_001393952.1| External link 16 SF
  16 PF
gi|21221840|ref|NP_627619.1| External link sf SF
  sf PF
gi|126437997|ref|YP_001073688.1| External link 22 SF
  22 PF
gi|118443720|ref|YP_877053.1| External link 12 SF
  12 PF
gi|126699396|ref|YP_001088293.1| External link 3x SF
  3x PF
gi|49487172|ref|YP_044393.1| External link ar SF
  ar PF
gi|18309328|ref|NP_561262.1| External link cu SF
  cu PF
gi|156980705|ref|YP_001442964.1| External link 71 SF
  71 PF
gi|145593631|ref|YP_001157928.1| External link 1h SF
  1h PF
gi|125717196|ref|YP_001034329.1| External link 5b SF
  5b PF
gi|15927968|ref|NP_375501.1| External link s2 SF
  s2 PF
gi|191639396|ref|YP_001988562.1| External link 95 SF
  95 PF
gi|150394899|ref|YP_001317574.1| External link 1i SF
  1i PF
gi|19553807|ref|NP_601809.1| External link c3 SF
  c3 PF
gi|119871170|ref|YP_941122.1| External link 46 SF
  46 PF
gi|158319797|ref|YP_001512304.1| External link 68 SF
  68 PF
gi|161510582|ref|YP_001576241.1| External link 6o SF
  6o PF
gi|21284041|ref|NP_647129.1| External link s1 SF
  s1 PF
gi|151222502|ref|YP_001333324.1| External link 5p SF
  5p PF
gi|88196314|ref|YP_501136.1| External link aq SF
  aq PF
gi|157150046|ref|YP_001449547.1| External link 6s SF
  6s PF
gi|152977246|ref|YP_001376763.1| External link 0w SF
  0w PF
gi|145296604|ref|YP_001139425.1| External link 4e SF
  4e PF
gi|29831200|ref|NP_825834.1| External link s9 SF
  s9 PF
gi|148268827|ref|YP_001247770.1| External link 2c SF
  2c PF
gi|159036619|ref|YP_001535872.1| External link 61 SF
  61 PF
gi|15925380|ref|NP_372914.1| External link sa SF
  sa PF
gi|182435827|ref|YP_001823546.1| External link 7n SF
  7n PF
gi|15902693|ref|NP_358243.1| External link st SF
  st PF
gi|108802018|ref|YP_642215.1| External link yb SF
  yb PF
gi|42779501|ref|NP_976748.1| External link bx SF
  bx PF
gi|62391447|ref|YP_226849.1| External link cb SF
  cb PF
gi|110799210|ref|YP_694791.1| External link 2f SF
  2f PF
gi|116495912|ref|YP_807646.1| External link 1o SF
  1o PF
gi|16331904|ref|NP_442632.1| External link cs SF
  cs PF
gi|170759686|ref|YP_001788742.1| External link 8s SF
  8s PF
gi|126698194|ref|YP_001087091.1| External link 3x SF
  3x PF
gi|15896684|ref|NP_350033.1| External link ca SF
  ca PF
gi|160880178|ref|YP_001559146.1| External link 5z SF
  5z PF
gi|15895716|ref|NP_349065.1| External link ca SF
  ca PF
gi|52142829|ref|YP_084000.1| External link x5 SF
  x5 PF
gi|158321375|ref|YP_001513882.1| External link 68 SF
  68 PF
gi|159039203|ref|YP_001538456.1| External link 61 SF
  61 PF
gi|145593568|ref|YP_001157865.1| External link 1h SF
  1h PF
gi|83717448|ref|YP_439177.1| External link b5 SF
  b5 PF
gi|30020796|ref|NP_832427.1| External link bc SF
  bc PF