DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|21218626|ref|NP_624405.1| External link sf SF
  sf PF
gi|158422242|ref|YP_001523534.1| External link 75 SF
  75 PF
gi|50084723|ref|YP_046233.1| External link ab SF
  ab PF
gi|148253829|ref|YP_001238414.1| External link 42 SF
  42 PF
gi|170743271|ref|YP_001771926.1| External link 7s SF
  7s PF
gi|15891089|ref|NP_356761.1| External link au SF
  au PF
gi|170750449|ref|YP_001756709.1| External link 7w SF
  7w PF
gi|150015604|ref|YP_001307858.1| External link 03 SF
  03 PF
gi|153955139|ref|YP_001395904.1| External link 16 SF
  16 PF
gi|152970403|ref|YP_001335512.1| External link 2k SF
  2k PF
gi|27377623|ref|NP_769152.1| External link bj SF
  bj PF
gi|39934106|ref|NP_946382.1| External link rd SF
  rd PF
gi|77458635|ref|YP_348140.1| External link pn SF
  pn PF
gi|91788879|ref|YP_549831.1| External link p6 SF
  p6 PF
gi|170740015|ref|YP_001768670.1| External link 7s SF
  7s PF
gi|192289633|ref|YP_001990238.1| External link e7 SF
  e7 PF
gi|118466066|ref|YP_880268.1| External link 59 SF
  59 PF
gi|88601566|ref|YP_501744.1| External link m6 SF
  m6 PF
gi|29833978|ref|NP_828612.1| External link s9 SF
  s9 PF
gi|110635258|ref|YP_675466.1| External link 0p SF
  0p PF
AC189045.2_FGT012 External link ze SF
  ze PF
gi|30019537|ref|NP_831168.1| External link bc SF
  bc PF
gi|148254952|ref|YP_001239537.1| External link 42 SF
  42 PF
gi|151222630|ref|YP_001333452.1| External link 5p SF
  5p PF
gi|42782120|ref|NP_979367.1| External link bx SF
  bx PF
gi|183219495|ref|YP_001837491.1| External link 83 SF
  83 PF
gi|42780580|ref|NP_977827.1| External link bx SF
  bx PF
gi|148258672|ref|YP_001243257.1| External link 42 SF
  42 PF
gi|76787134|ref|YP_329543.1| External link a9 SF
  a9 PF
gi|114570797|ref|YP_757477.1| External link 2x SF
  2x PF
gi|29827725|ref|NP_822359.1| External link s9 SF
  s9 PF
gi|170738086|ref|YP_001779346.1| External link 7j SF
  7j PF
gi|19554182|ref|NP_602184.1| External link c3 SF
  c3 PF
gi|158320220|ref|YP_001512727.1| External link 68 SF
  68 PF
gi|30022210|ref|NP_833841.1| External link bc SF
  bc PF
gi|156980835|ref|YP_001443094.1| External link 71 SF
  71 PF
gi|119025750|ref|YP_909595.1| External link 5g SF
  5g PF
gi|192293212|ref|YP_001993817.1| External link e7 SF
  e7 PF
gi|116334685|ref|YP_796212.1| External link 52 SF
  52 PF
gi|30260489|ref|NP_842866.1| External link ba SF
  ba PF
gi|20092006|ref|NP_618081.1| External link ma SF
  ma PF
gi|126435246|ref|YP_001070937.1| External link 22 SF
  22 PF
gi|46581313|ref|YP_012121.1| External link dv SF
  dv PF
gi|113969936|ref|YP_733729.1| External link 0f SF
  0f PF
gi|15837955|ref|NP_298643.1| External link xf SF
  xf PF
gi|16760343|ref|NP_455960.1| External link ty SF
  ty PF
gi|88603206|ref|YP_503384.1| External link m6 SF
  m6 PF
gi|157161104|ref|YP_001458422.1| External link 72 SF
  72 PF
gi|118469896|ref|YP_884603.1| External link 3e SF
  3e PF
gi|182436956|ref|YP_001824675.1| External link 7n SF
  7n PF