DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|28209852|ref|NP_780796.1| External link te SF
  te PF
gi|116695647|ref|YP_841223.1| External link 2j SF
  2j PF No hits
gi|117619608|ref|YP_855753.1| External link 33 SF
  33 PF
gi|86741940|ref|YP_482340.1| External link fk SF
  fk PF No hits
gi|94313473|ref|YP_586682.1| External link r4 SF
  r4 PF
gi|72160473|ref|YP_288130.1| External link tf SF
  tf PF
gi|184199735|ref|YP_001853942.1| External link 98 SF
  98 PF
gi|59710762|ref|YP_203538.1| External link vf SF
  vf PF
gi|73537731|ref|YP_298098.1| External link rl SF
  rl PF