DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: C-terminal effector domain of the bipartite response regulators.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|116622864|ref|YP_825020.1| External link 25 SF
  25 PF
gi|158315618|ref|YP_001508126.1| External link 6p SF
  6p PF
gi|52079041|ref|YP_077832.1| External link lf SF
  lf PF
gi|52784413|ref|YP_090242.1| External link lc SF
  lc PF
gi|15645657|ref|NP_207833.1| External link hp SF
  hp PF
gi|152977169|ref|YP_001376686.1| External link 0w SF
  0w PF
gi|89893318|ref|YP_516805.1| External link d2 SF
  d2 PF
gi|58583964|ref|YP_202980.1| External link xo SF
  xo PF
gi|53711490|ref|YP_097482.1| External link fa SF
  fa PF
gi|161621183|ref|YP_001595069.1| External link 6z SF
  6z PF
gi|153937909|ref|YP_001389684.1| External link 5c SF
  5c PF
gi|170755846|ref|YP_001781047.1| External link 8f SF
  8f PF
gi|156743103|ref|YP_001433232.1| External link 77 SF
  77 PF
gi|153935268|ref|YP_001387296.1| External link 2u SF
  2u PF
gi|161615674|ref|YP_001589639.1| External link 78 SF
  78 PF
gi|160897159|ref|YP_001562741.1| External link 7d SF
  7d PF
gi|56476059|ref|YP_157648.1| External link az SF
  az PF
gi|42784035|ref|NP_981282.1| External link bx SF
  bx PF
gi|113954797|ref|YP_730428.1| External link 0h SF
  0h PF
gi|186473479|ref|YP_001860821.1| External link 90 SF
  90 PF
gi|148379370|ref|YP_001253911.1| External link 0i SF
  0i PF
gi|17988502|ref|NP_541135.1| External link bm SF
  bm PF
gi|49481771|ref|YP_038879.1| External link ko SF
  ko PF
gi|57866221|ref|YP_187908.1| External link ep SF
  ep PF
gi|52140668|ref|YP_086162.1| External link x5 SF
  x5 PF
gi|152993562|ref|YP_001359283.1| External link 1t SF
  1t PF
gi|57234866|ref|YP_181052.1| External link et SF
  et PF
gi|73663371|ref|YP_302152.1| External link zt SF
  zt PF
gi|146321591|ref|YP_001201302.1| External link 2h SF
  2h PF
gi|160896539|ref|YP_001562121.1| External link 7d SF
  7d PF
gi|153940477|ref|YP_001389642.1| External link 5c SF
  5c PF
gi|186477467|ref|YP_001858937.1| External link 90 SF
  90 PF
gi|116493445|ref|YP_805180.1| External link 0d SF
  0d PF
gi|21230623|ref|NP_636540.1| External link xd SF
  xd PF
gi|49187716|ref|YP_030969.1| External link b0 SF
  b0 PF
gi|170735279|ref|YP_001774393.1| External link 7j SF
  7j PF
gi|84625748|ref|YP_453120.1| External link xz SF
  xz PF
gi|109947684|ref|YP_664912.1| External link hl SF
  hl PF
gi|75907720|ref|YP_322016.1| External link va SF
  va PF
gi|170759073|ref|YP_001785608.1| External link 8s SF
  8s PF
gi|126643382|ref|YP_001086366.1| External link 1l SF
  1l PF
gi|17227625|ref|NP_484173.1| External link no SF
  no PF
gi|125973317|ref|YP_001037227.1| External link 4x SF
  4x PF
gi|148656429|ref|YP_001276634.1| External link 4a SF
  4a PF
gi|163942574|ref|YP_001647458.1| External link 62 SF
  62 PF
gi|167624766|ref|YP_001675060.1| External link 8l SF
  8l PF
gi|118479956|ref|YP_897107.1| External link 31 SF
  31 PF
gi|73749198|ref|YP_308437.1| External link dl SF
  dl PF
gi|54302428|ref|YP_132421.1| External link he SF
  he PF
gi|62317958|ref|YP_223811.1| External link b3 SF
  b3 PF